Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF292 and GFF293 are separated by 72 nucleotides GFF293 and GFF294 overlap by 4 nucleotides GFF294 and GFF295 are separated by 147 nucleotides
GFF292 - Isopentenyl-diphosphate delta-isomerase, at 307,273 to 308,610
GFF292
GFF293 - hypothetical protein, at 308,683 to 309,390
GFF293
GFF294 - Amidophosphoribosyltransferase, at 309,387 to 310,286
GFF294
GFF295 - hypothetical protein, at 310,434 to 311,120
GFF295
Position (kb) 309
310
311 Strain fitness (log2 ratio) -2
-1
0
1 at 308.507 kb on + strand at 308.507 kb on + strand at 308.507 kb on + strand at 308.508 kb on - strand at 308.508 kb on - strand at 308.508 kb on - strand at 308.610 kb on + strand at 308.610 kb on + strand at 308.610 kb on + strand at 308.610 kb on + strand at 308.611 kb on - strand at 308.891 kb on + strand, within GFF293 at 309.194 kb on + strand, within GFF293 at 309.195 kb on - strand, within GFF293 at 309.195 kb on - strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.197 kb on + strand, within GFF293 at 309.409 kb on + strand at 309.478 kb on + strand, within GFF294 at 309.499 kb on + strand, within GFF294 at 309.500 kb on - strand, within GFF294 at 309.668 kb on - strand, within GFF294 at 310.080 kb on + strand, within GFF294 at 310.341 kb on + strand at 310.341 kb on + strand at 310.472 kb on - strand at 310.472 kb on - strand at 310.555 kb on + strand, within GFF295 at 310.556 kb on - strand, within GFF295 at 310.556 kb on - strand, within GFF295 at 310.577 kb on - strand, within GFF295 at 310.600 kb on + strand, within GFF295 at 310.636 kb on + strand, within GFF295 at 310.669 kb on + strand, within GFF295 at 310.669 kb on + strand, within GFF295 at 310.717 kb on + strand, within GFF295 at 310.717 kb on + strand, within GFF295 at 310.717 kb on + strand, within GFF295 at 310.876 kb on - strand, within GFF295 at 310.876 kb on - strand, within GFF295 at 310.876 kb on - strand, within GFF295 at 311.041 kb on + strand, within GFF295 at 311.042 kb on - strand, within GFF295
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 308,507 + -0.2 308,507 + -0.4 308,507 + +0.3 308,508 - -0.2 308,508 - +1.1 308,508 - -0.4 308,610 + -0.2 308,610 + +1.1 308,610 + -0.4 308,610 + +0.2 308,611 - -0.1 308,891 + GFF293 0.29 -0.2 309,194 + GFF293 0.72 -0.4 309,195 - GFF293 0.72 -1.7 309,195 - GFF293 0.72 -0.8 309,197 + GFF293 0.73 +0.1 309,197 + GFF293 0.73 +0.3 309,197 + GFF293 0.73 -1.6 309,197 + GFF293 0.73 +1.0 309,409 + -0.0 309,478 + GFF294 0.10 -0.1 309,499 + GFF294 0.12 -1.0 309,500 - GFF294 0.13 -0.7 309,668 - GFF294 0.31 -0.7 310,080 + GFF294 0.77 -0.1 310,341 + -0.2 310,341 + -0.1 310,472 - -2.2 310,472 - +1.3 310,555 + GFF295 0.18 +1.6 310,556 - GFF295 0.18 -0.7 310,556 - GFF295 0.18 -1.9 310,577 - GFF295 0.21 -1.8 310,600 + GFF295 0.24 -0.2 310,636 + GFF295 0.29 -0.4 310,669 + GFF295 0.34 -0.2 310,669 + GFF295 0.34 -1.2 310,717 + GFF295 0.41 -0.4 310,717 + GFF295 0.41 -0.4 310,717 + GFF295 0.41 -1.2 310,876 - GFF295 0.64 -1.4 310,876 - GFF295 0.64 -1.2 310,876 - GFF295 0.64 -0.0 311,041 + GFF295 0.88 -1.3 311,042 - GFF295 0.89 -0.2
Or see this region's nucleotide sequence