Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2921 and GFF2922 overlap by 4 nucleotides GFF2922 and GFF2923 are separated by 13 nucleotides GFF2923 and GFF2924 are separated by 353 nucleotides
GFF2921 - hypothetical protein, at 640,981 to 641,616
GFF2921
GFF2922 - hypothetical protein, at 641,613 to 642,599
GFF2922
GFF2923 - hypothetical protein, at 642,613 to 643,668
GFF2923
GFF2924 - Sarcosine oxidase subunit beta, at 644,022 to 645,275
GFF2924
Position (kb) 642
643
644 Strain fitness (log2 ratio) -2
-1
0
1
2 at 641.812 kb on + strand, within GFF2922 at 641.812 kb on + strand, within GFF2922 at 641.812 kb on + strand, within GFF2922 at 641.813 kb on - strand, within GFF2922 at 641.813 kb on - strand, within GFF2922 at 641.918 kb on - strand, within GFF2922 at 642.425 kb on - strand, within GFF2922 at 642.752 kb on + strand, within GFF2923 at 642.752 kb on + strand, within GFF2923 at 642.752 kb on + strand, within GFF2923 at 642.753 kb on - strand, within GFF2923 at 642.899 kb on + strand, within GFF2923 at 642.900 kb on - strand, within GFF2923 at 642.900 kb on - strand, within GFF2923 at 642.900 kb on - strand, within GFF2923 at 643.109 kb on + strand, within GFF2923 at 643.110 kb on - strand, within GFF2923 at 643.110 kb on - strand, within GFF2923 at 643.110 kb on - strand, within GFF2923 at 643.110 kb on - strand, within GFF2923 at 643.533 kb on + strand, within GFF2923 at 643.533 kb on + strand, within GFF2923 at 643.534 kb on - strand, within GFF2923 at 643.534 kb on - strand, within GFF2923 at 643.534 kb on - strand, within GFF2923 at 643.534 kb on - strand, within GFF2923 at 643.534 kb on - strand, within GFF2923 at 643.534 kb on - strand, within GFF2923 at 643.535 kb on + strand, within GFF2923 at 643.536 kb on - strand, within GFF2923 at 643.536 kb on - strand, within GFF2923 at 643.778 kb on + strand at 643.778 kb on + strand at 643.805 kb on + strand at 643.806 kb on - strand at 643.806 kb on - strand at 644.119 kb on - strand at 644.167 kb on - strand, within GFF2924 at 644.167 kb on - strand, within GFF2924 at 644.167 kb on - strand, within GFF2924 at 644.169 kb on + strand, within GFF2924 at 644.169 kb on + strand, within GFF2924 at 644.169 kb on + strand, within GFF2924 at 644.169 kb on + strand, within GFF2924 at 644.277 kb on + strand, within GFF2924 at 644.277 kb on + strand, within GFF2924 at 644.277 kb on + strand, within GFF2924 at 644.278 kb on - strand, within GFF2924 at 644.278 kb on - strand, within GFF2924 at 644.346 kb on + strand, within GFF2924 at 644.346 kb on + strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.347 kb on - strand, within GFF2924 at 644.427 kb on + strand, within GFF2924
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 641,812 + GFF2922 0.20 +2.1 641,812 + GFF2922 0.20 -1.7 641,812 + GFF2922 0.20 -1.1 641,813 - GFF2922 0.20 -0.6 641,813 - GFF2922 0.20 -1.0 641,918 - GFF2922 0.31 -1.8 642,425 - GFF2922 0.82 -0.5 642,752 + GFF2923 0.13 -1.5 642,752 + GFF2923 0.13 -1.3 642,752 + GFF2923 0.13 +0.5 642,753 - GFF2923 0.13 -0.3 642,899 + GFF2923 0.27 +1.0 642,900 - GFF2923 0.27 +0.3 642,900 - GFF2923 0.27 -1.3 642,900 - GFF2923 0.27 -0.3 643,109 + GFF2923 0.47 +0.2 643,110 - GFF2923 0.47 +1.3 643,110 - GFF2923 0.47 -1.2 643,110 - GFF2923 0.47 -0.8 643,110 - GFF2923 0.47 -0.7 643,533 + GFF2923 0.87 +1.1 643,533 + GFF2923 0.87 +0.2 643,534 - GFF2923 0.87 +0.3 643,534 - GFF2923 0.87 +1.0 643,534 - GFF2923 0.87 +1.1 643,534 - GFF2923 0.87 +0.3 643,534 - GFF2923 0.87 -0.5 643,534 - GFF2923 0.87 -0.1 643,535 + GFF2923 0.87 -0.1 643,536 - GFF2923 0.87 +0.7 643,536 - GFF2923 0.87 +0.0 643,778 + -0.3 643,778 + -0.7 643,805 + -1.3 643,806 - -0.6 643,806 - -0.3 644,119 - -0.7 644,167 - GFF2924 0.12 -1.0 644,167 - GFF2924 0.12 -0.7 644,167 - GFF2924 0.12 +0.0 644,169 + GFF2924 0.12 -0.6 644,169 + GFF2924 0.12 -0.5 644,169 + GFF2924 0.12 +0.3 644,169 + GFF2924 0.12 +0.4 644,277 + GFF2924 0.20 +0.0 644,277 + GFF2924 0.20 +0.3 644,277 + GFF2924 0.20 +0.0 644,278 - GFF2924 0.20 +0.7 644,278 - GFF2924 0.20 -1.4 644,346 + GFF2924 0.26 -0.1 644,346 + GFF2924 0.26 -0.1 644,347 - GFF2924 0.26 +0.5 644,347 - GFF2924 0.26 +1.6 644,347 - GFF2924 0.26 +0.1 644,347 - GFF2924 0.26 -0.2 644,427 + GFF2924 0.32 -0.3
Or see this region's nucleotide sequence