Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2911 and GFF2912 are separated by 40 nucleotides GFF2912 and GFF2913 are separated by 12 nucleotides GFF2913 and GFF2914 are separated by 7 nucleotides
GFF2911 - hypothetical protein, at 629,099 to 630,073
GFF2911
GFF2912 - Spermidine/putrescine import ATP-binding protein PotA, at 630,114 to 631,169
GFF2912
GFF2913 - hypothetical protein, at 631,182 to 631,988
GFF2913
GFF2914 - hypothetical protein, at 631,996 to 632,922
GFF2914
Position (kb) 630
631
632 Strain fitness (log2 ratio) -2
-1
0
1 at 629.316 kb on + strand, within GFF2911 at 629.317 kb on - strand, within GFF2911 at 629.317 kb on - strand, within GFF2911 at 629.376 kb on + strand, within GFF2911 at 629.376 kb on + strand, within GFF2911 at 629.376 kb on + strand, within GFF2911 at 629.376 kb on + strand, within GFF2911 at 629.377 kb on - strand, within GFF2911 at 629.395 kb on - strand, within GFF2911 at 629.688 kb on + strand, within GFF2911 at 629.688 kb on + strand, within GFF2911 at 629.688 kb on + strand, within GFF2911 at 629.689 kb on - strand, within GFF2911 at 629.721 kb on + strand, within GFF2911 at 629.722 kb on - strand, within GFF2911 at 629.722 kb on - strand, within GFF2911 at 629.722 kb on - strand, within GFF2911 at 629.722 kb on - strand, within GFF2911 at 629.722 kb on - strand, within GFF2911 at 629.769 kb on + strand, within GFF2911 at 629.769 kb on + strand, within GFF2911 at 629.865 kb on + strand, within GFF2911 at 629.866 kb on - strand, within GFF2911 at 629.866 kb on - strand, within GFF2911 at 629.866 kb on - strand, within GFF2911 at 629.866 kb on - strand, within GFF2911 at 629.866 kb on - strand, within GFF2911 at 630.604 kb on - strand, within GFF2912 at 630.920 kb on - strand, within GFF2912 at 630.920 kb on - strand, within GFF2912 at 631.297 kb on + strand, within GFF2913 at 631.297 kb on + strand, within GFF2913 at 631.297 kb on + strand, within GFF2913 at 631.486 kb on + strand, within GFF2913 at 631.486 kb on + strand, within GFF2913 at 631.487 kb on - strand, within GFF2913 at 631.837 kb on + strand, within GFF2913 at 631.853 kb on - strand, within GFF2913 at 631.960 kb on + strand at 631.960 kb on + strand at 631.961 kb on - strand at 631.961 kb on - strand at 631.961 kb on - strand at 632.015 kb on + strand at 632.130 kb on - strand, within GFF2914
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 629,316 + GFF2911 0.22 -0.1 629,317 - GFF2911 0.22 -0.7 629,317 - GFF2911 0.22 +1.2 629,376 + GFF2911 0.28 +0.2 629,376 + GFF2911 0.28 -0.3 629,376 + GFF2911 0.28 -1.1 629,376 + GFF2911 0.28 -1.3 629,377 - GFF2911 0.29 -1.0 629,395 - GFF2911 0.30 -2.1 629,688 + GFF2911 0.60 +0.6 629,688 + GFF2911 0.60 +1.0 629,688 + GFF2911 0.60 -0.2 629,689 - GFF2911 0.61 -0.1 629,721 + GFF2911 0.64 +0.6 629,722 - GFF2911 0.64 +0.0 629,722 - GFF2911 0.64 -0.3 629,722 - GFF2911 0.64 +0.3 629,722 - GFF2911 0.64 -1.0 629,722 - GFF2911 0.64 +0.3 629,769 + GFF2911 0.69 +0.2 629,769 + GFF2911 0.69 +0.4 629,865 + GFF2911 0.79 +0.3 629,866 - GFF2911 0.79 +0.1 629,866 - GFF2911 0.79 +0.2 629,866 - GFF2911 0.79 -0.4 629,866 - GFF2911 0.79 +0.2 629,866 - GFF2911 0.79 -0.1 630,604 - GFF2912 0.46 +0.1 630,920 - GFF2912 0.76 -1.1 630,920 - GFF2912 0.76 -0.3 631,297 + GFF2913 0.14 +0.2 631,297 + GFF2913 0.14 -0.4 631,297 + GFF2913 0.14 -0.5 631,486 + GFF2913 0.38 -0.8 631,486 + GFF2913 0.38 +0.1 631,487 - GFF2913 0.38 -1.9 631,837 + GFF2913 0.81 +0.3 631,853 - GFF2913 0.83 -0.2 631,960 + +0.3 631,960 + +1.2 631,961 - +0.0 631,961 - +0.4 631,961 - -1.4 632,015 + +0.1 632,130 - GFF2914 0.14 -0.3
Or see this region's nucleotide sequence