Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2893 and GFF2894 overlap by 4 nucleotides GFF2894 and GFF2895 overlap by 4 nucleotides
GFF2893 - hypothetical protein, at 607,154 to 608,368
GFF2893
GFF2894 - hypothetical protein, at 608,365 to 609,228
GFF2894
GFF2895 - Caffeine dehydrogenase subunit alpha, at 609,225 to 611,582
GFF2895
Position (kb) 608
609
610 Strain fitness (log2 ratio) -2
-1
0
1
2 at 607.374 kb on + strand, within GFF2893 at 607.649 kb on + strand, within GFF2893 at 607.661 kb on + strand, within GFF2893 at 608.616 kb on + strand, within GFF2894 at 608.617 kb on - strand, within GFF2894 at 608.681 kb on + strand, within GFF2894 at 608.682 kb on - strand, within GFF2894 at 608.952 kb on + strand, within GFF2894 at 608.952 kb on + strand, within GFF2894 at 609.014 kb on + strand, within GFF2894 at 609.014 kb on + strand, within GFF2894 at 609.015 kb on - strand, within GFF2894 at 609.015 kb on - strand, within GFF2894 at 609.021 kb on + strand, within GFF2894 at 609.021 kb on + strand, within GFF2894 at 609.022 kb on - strand, within GFF2894 at 609.022 kb on - strand, within GFF2894 at 609.022 kb on - strand, within GFF2894 at 609.101 kb on - strand, within GFF2894 at 609.408 kb on - strand at 609.409 kb on + strand at 609.409 kb on + strand at 609.409 kb on + strand at 609.409 kb on + strand at 609.410 kb on - strand at 609.475 kb on + strand, within GFF2895 at 609.475 kb on + strand, within GFF2895 at 609.476 kb on - strand, within GFF2895 at 609.476 kb on - strand, within GFF2895 at 609.532 kb on + strand, within GFF2895 at 609.532 kb on + strand, within GFF2895 at 609.533 kb on - strand, within GFF2895 at 609.628 kb on + strand, within GFF2895 at 609.691 kb on + strand, within GFF2895 at 609.724 kb on + strand, within GFF2895 at 609.787 kb on + strand, within GFF2895 at 610.014 kb on + strand, within GFF2895 at 610.014 kb on + strand, within GFF2895 at 610.014 kb on + strand, within GFF2895 at 610.014 kb on + strand, within GFF2895 at 610.014 kb on + strand, within GFF2895 at 610.015 kb on - strand, within GFF2895 at 610.226 kb on - strand, within GFF2895
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 607,374 + GFF2893 0.18 +0.1 607,649 + GFF2893 0.41 +0.9 607,661 + GFF2893 0.42 -0.2 608,616 + GFF2894 0.29 -0.1 608,617 - GFF2894 0.29 +0.6 608,681 + GFF2894 0.37 -0.9 608,682 - GFF2894 0.37 -2.5 608,952 + GFF2894 0.68 -0.2 608,952 + GFF2894 0.68 -0.3 609,014 + GFF2894 0.75 -0.5 609,014 + GFF2894 0.75 -0.2 609,015 - GFF2894 0.75 -0.3 609,015 - GFF2894 0.75 -1.9 609,021 + GFF2894 0.76 +1.4 609,021 + GFF2894 0.76 -0.7 609,022 - GFF2894 0.76 +0.6 609,022 - GFF2894 0.76 -0.5 609,022 - GFF2894 0.76 -0.4 609,101 - GFF2894 0.85 -0.2 609,408 - +0.7 609,409 + +0.1 609,409 + -0.6 609,409 + -1.4 609,409 + -0.9 609,410 - +0.7 609,475 + GFF2895 0.11 -0.1 609,475 + GFF2895 0.11 -0.3 609,476 - GFF2895 0.11 -0.4 609,476 - GFF2895 0.11 -0.7 609,532 + GFF2895 0.13 -0.1 609,532 + GFF2895 0.13 -0.5 609,533 - GFF2895 0.13 -1.4 609,628 + GFF2895 0.17 -1.9 609,691 + GFF2895 0.20 +1.0 609,724 + GFF2895 0.21 +0.6 609,787 + GFF2895 0.24 -1.0 610,014 + GFF2895 0.33 +0.1 610,014 + GFF2895 0.33 -0.2 610,014 + GFF2895 0.33 -0.4 610,014 + GFF2895 0.33 -0.3 610,014 + GFF2895 0.33 +0.3 610,015 - GFF2895 0.34 -0.3 610,226 - GFF2895 0.42 +1.9
Or see this region's nucleotide sequence