Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2872 and GFF2873 are separated by 72 nucleotides GFF2873 and GFF2874 are separated by 100 nucleotides
GFF2872 - Succinate semialdehyde dehydrogenase [NAD(P)+] Sad, at 588,922 to 590,292
GFF2872
GFF2873 - hypothetical protein, at 590,365 to 591,282
GFF2873
GFF2874 - Hydrogen peroxide-inducible genes activator, at 591,383 to 592,318
GFF2874
Position (kb) 590
591
592 Strain fitness (log2 ratio) -2
-1
0
1
2 at 589.396 kb on - strand, within GFF2872 at 589.886 kb on + strand, within GFF2872 at 589.902 kb on - strand, within GFF2872 at 589.991 kb on - strand, within GFF2872 at 590.089 kb on + strand, within GFF2872 at 590.270 kb on + strand at 590.348 kb on + strand at 590.379 kb on - strand at 590.406 kb on - strand at 590.471 kb on + strand, within GFF2873 at 590.471 kb on + strand, within GFF2873 at 590.639 kb on + strand, within GFF2873 at 590.639 kb on + strand, within GFF2873 at 590.639 kb on + strand, within GFF2873 at 590.639 kb on + strand, within GFF2873 at 590.640 kb on - strand, within GFF2873 at 590.640 kb on - strand, within GFF2873 at 590.640 kb on - strand, within GFF2873 at 590.640 kb on - strand, within GFF2873 at 590.640 kb on - strand, within GFF2873 at 590.640 kb on - strand, within GFF2873 at 590.717 kb on + strand, within GFF2873 at 590.717 kb on + strand, within GFF2873 at 590.718 kb on - strand, within GFF2873 at 590.718 kb on - strand, within GFF2873 at 590.718 kb on - strand, within GFF2873 at 590.718 kb on - strand, within GFF2873 at 590.861 kb on + strand, within GFF2873 at 590.861 kb on + strand, within GFF2873 at 590.861 kb on + strand, within GFF2873 at 590.861 kb on + strand, within GFF2873 at 590.984 kb on + strand, within GFF2873 at 590.984 kb on + strand, within GFF2873 at 590.984 kb on + strand, within GFF2873 at 590.984 kb on + strand, within GFF2873 at 590.985 kb on - strand, within GFF2873 at 591.044 kb on + strand, within GFF2873 at 591.044 kb on + strand, within GFF2873 at 591.334 kb on + strand at 591.357 kb on + strand at 591.460 kb on + strand at 591.460 kb on + strand at 591.460 kb on + strand at 591.461 kb on - strand at 591.461 kb on - strand at 591.549 kb on - strand, within GFF2874 at 591.568 kb on + strand, within GFF2874 at 591.755 kb on + strand, within GFF2874 at 591.788 kb on + strand, within GFF2874 at 591.788 kb on + strand, within GFF2874 at 591.788 kb on + strand, within GFF2874 at 591.789 kb on - strand, within GFF2874 at 591.789 kb on - strand, within GFF2874 at 592.128 kb on - strand, within GFF2874 at 592.128 kb on - strand, within GFF2874
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 589,396 - GFF2872 0.35 +0.4 589,886 + GFF2872 0.70 +0.3 589,902 - GFF2872 0.71 -0.7 589,991 - GFF2872 0.78 -0.8 590,089 + GFF2872 0.85 +1.1 590,270 + +0.0 590,348 + -0.2 590,379 - -0.9 590,406 - -1.5 590,471 + GFF2873 0.12 -0.0 590,471 + GFF2873 0.12 +0.0 590,639 + GFF2873 0.30 +2.2 590,639 + GFF2873 0.30 -0.3 590,639 + GFF2873 0.30 -0.2 590,639 + GFF2873 0.30 -0.4 590,640 - GFF2873 0.30 -0.8 590,640 - GFF2873 0.30 +0.2 590,640 - GFF2873 0.30 +0.7 590,640 - GFF2873 0.30 +1.6 590,640 - GFF2873 0.30 +0.2 590,640 - GFF2873 0.30 -0.5 590,717 + GFF2873 0.38 +0.8 590,717 + GFF2873 0.38 -0.3 590,718 - GFF2873 0.38 -0.2 590,718 - GFF2873 0.38 +0.1 590,718 - GFF2873 0.38 -0.8 590,718 - GFF2873 0.38 +0.4 590,861 + GFF2873 0.54 -0.4 590,861 + GFF2873 0.54 -0.1 590,861 + GFF2873 0.54 +0.6 590,861 + GFF2873 0.54 -0.2 590,984 + GFF2873 0.67 -0.0 590,984 + GFF2873 0.67 -0.4 590,984 + GFF2873 0.67 +1.2 590,984 + GFF2873 0.67 -1.6 590,985 - GFF2873 0.68 +0.0 591,044 + GFF2873 0.74 -0.2 591,044 + GFF2873 0.74 -0.1 591,334 + +0.1 591,357 + -1.8 591,460 + -0.6 591,460 + -0.5 591,460 + -1.7 591,461 - -0.0 591,461 - -0.4 591,549 - GFF2874 0.18 -0.5 591,568 + GFF2874 0.20 +0.4 591,755 + GFF2874 0.40 -0.1 591,788 + GFF2874 0.43 +0.6 591,788 + GFF2874 0.43 +0.8 591,788 + GFF2874 0.43 -0.3 591,789 - GFF2874 0.43 +0.3 591,789 - GFF2874 0.43 -0.3 592,128 - GFF2874 0.80 +1.9 592,128 - GFF2874 0.80 +0.7
Or see this region's nucleotide sequence