Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2866 and GFF2867 are separated by 91 nucleotides GFF2867 and GFF2868 are separated by 88 nucleotides
GFF2866 - Betaine aldehyde dehydrogenase, at 582,240 to 583,727
GFF2866
GFF2867 - 4-hydroxybenzoate transporter PcaK, at 583,819 to 585,201
GFF2867
GFF2868 - 2-keto-4-carboxy-3-hexenedioate hydratase, at 585,290 to 586,237
GFF2868
Position (kb) 583
584
585
586 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 582.905 kb on + strand, within GFF2866 at 582.905 kb on + strand, within GFF2866 at 582.906 kb on - strand, within GFF2866 at 582.906 kb on - strand, within GFF2866 at 583.262 kb on + strand, within GFF2866 at 583.310 kb on - strand, within GFF2866 at 583.333 kb on + strand, within GFF2866 at 584.033 kb on + strand, within GFF2867 at 584.033 kb on + strand, within GFF2867 at 584.034 kb on - strand, within GFF2867 at 584.034 kb on - strand, within GFF2867 at 584.034 kb on - strand, within GFF2867 at 584.049 kb on - strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.054 kb on + strand, within GFF2867 at 584.055 kb on - strand, within GFF2867 at 584.055 kb on - strand, within GFF2867 at 584.085 kb on - strand, within GFF2867 at 584.087 kb on + strand, within GFF2867 at 584.087 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.342 kb on + strand, within GFF2867 at 584.399 kb on + strand, within GFF2867 at 584.399 kb on + strand, within GFF2867 at 584.400 kb on - strand, within GFF2867 at 584.711 kb on + strand, within GFF2867 at 584.711 kb on + strand, within GFF2867 at 584.762 kb on + strand, within GFF2867 at 584.762 kb on + strand, within GFF2867 at 584.762 kb on + strand, within GFF2867 at 584.763 kb on - strand, within GFF2867 at 584.763 kb on - strand, within GFF2867 at 584.763 kb on - strand, within GFF2867 at 584.835 kb on - strand, within GFF2867 at 585.186 kb on + strand at 585.187 kb on - strand at 585.726 kb on + strand, within GFF2868 at 585.726 kb on + strand, within GFF2868 at 585.727 kb on - strand, within GFF2868 at 585.727 kb on - strand, within GFF2868 at 585.727 kb on - strand, within GFF2868 at 585.738 kb on + strand, within GFF2868 at 585.738 kb on + strand, within GFF2868 at 585.738 kb on + strand, within GFF2868 at 585.739 kb on - strand, within GFF2868 at 585.739 kb on - strand, within GFF2868 at 585.739 kb on - strand, within GFF2868 at 585.780 kb on + strand, within GFF2868 at 585.780 kb on + strand, within GFF2868 at 585.780 kb on + strand, within GFF2868 at 585.780 kb on + strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.781 kb on - strand, within GFF2868 at 585.925 kb on - strand, within GFF2868 at 585.925 kb on - strand, within GFF2868 at 586.073 kb on + strand, within GFF2868 at 586.074 kb on - strand, within GFF2868 at 586.179 kb on + strand at 586.179 kb on + strand at 586.179 kb on + strand at 586.179 kb on + strand at 586.179 kb on + strand at 586.179 kb on + strand at 586.179 kb on + strand at 586.179 kb on + strand at 586.180 kb on - strand at 586.180 kb on - strand at 586.180 kb on - strand at 586.180 kb on - strand at 586.180 kb on - strand at 586.197 kb on + strand at 586.198 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 582,905 + GFF2866 0.45 -0.2 582,905 + GFF2866 0.45 +0.3 582,906 - GFF2866 0.45 +1.5 582,906 - GFF2866 0.45 -1.6 583,262 + GFF2866 0.69 +0.5 583,310 - GFF2866 0.72 +0.8 583,333 + GFF2866 0.73 -0.5 584,033 + GFF2867 0.15 -0.6 584,033 + GFF2867 0.15 +0.9 584,034 - GFF2867 0.16 +0.7 584,034 - GFF2867 0.16 +0.4 584,034 - GFF2867 0.16 -1.9 584,049 - GFF2867 0.17 +0.2 584,054 + GFF2867 0.17 +0.5 584,054 + GFF2867 0.17 -0.8 584,054 + GFF2867 0.17 +0.2 584,054 + GFF2867 0.17 -0.1 584,054 + GFF2867 0.17 -1.8 584,055 - GFF2867 0.17 +0.6 584,055 - GFF2867 0.17 -0.0 584,085 - GFF2867 0.19 +0.9 584,087 + GFF2867 0.19 +0.4 584,087 + GFF2867 0.19 -0.4 584,342 + GFF2867 0.38 -0.2 584,342 + GFF2867 0.38 +0.2 584,342 + GFF2867 0.38 -0.5 584,342 + GFF2867 0.38 +0.5 584,399 + GFF2867 0.42 +0.5 584,399 + GFF2867 0.42 +0.2 584,400 - GFF2867 0.42 -0.9 584,711 + GFF2867 0.64 +0.7 584,711 + GFF2867 0.64 +1.3 584,762 + GFF2867 0.68 +0.2 584,762 + GFF2867 0.68 -0.2 584,762 + GFF2867 0.68 -0.1 584,763 - GFF2867 0.68 +0.2 584,763 - GFF2867 0.68 -0.3 584,763 - GFF2867 0.68 -0.7 584,835 - GFF2867 0.73 -0.3 585,186 + -0.6 585,187 - -0.3 585,726 + GFF2868 0.46 +1.1 585,726 + GFF2868 0.46 -1.9 585,727 - GFF2868 0.46 -1.0 585,727 - GFF2868 0.46 +0.3 585,727 - GFF2868 0.46 +0.7 585,738 + GFF2868 0.47 -0.7 585,738 + GFF2868 0.47 -0.5 585,738 + GFF2868 0.47 -0.2 585,739 - GFF2868 0.47 -1.1 585,739 - GFF2868 0.47 +0.5 585,739 - GFF2868 0.47 -1.7 585,780 + GFF2868 0.52 +0.8 585,780 + GFF2868 0.52 -0.3 585,780 + GFF2868 0.52 +0.5 585,780 + GFF2868 0.52 -1.5 585,781 - GFF2868 0.52 -0.5 585,781 - GFF2868 0.52 +0.7 585,781 - GFF2868 0.52 +0.1 585,781 - GFF2868 0.52 -0.5 585,781 - GFF2868 0.52 -1.0 585,781 - GFF2868 0.52 -0.4 585,781 - GFF2868 0.52 -0.4 585,925 - GFF2868 0.67 +0.6 585,925 - GFF2868 0.67 +0.7 586,073 + GFF2868 0.83 +0.3 586,074 - GFF2868 0.83 +1.0 586,179 + +0.7 586,179 + -1.6 586,179 + -0.2 586,179 + -0.7 586,179 + -0.7 586,179 + -2.2 586,179 + -0.3 586,179 + -0.6 586,180 - +0.5 586,180 - +0.0 586,180 - -0.7 586,180 - +0.3 586,180 - +0.1 586,197 + -3.0 586,198 - -0.2
Or see this region's nucleotide sequence