Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF281 and GFF282 are separated by 106 nucleotides GFF282 and GFF283 overlap by 8 nucleotides
GFF281 - Formyltetrahydrofolate deformylase, at 295,955 to 296,824
GFF281
GFF282 - hypothetical protein, at 296,931 to 297,539
GFF282
GFF283 - Sarcosine oxidase subunit alpha, at 297,532 to 300,486
GFF283
Position (kb) 296
297
298 Strain fitness (log2 ratio) -2
-1
0
1 at 296.835 kb on + strand at 296.835 kb on + strand at 296.836 kb on - strand at 296.965 kb on + strand at 296.965 kb on + strand at 296.966 kb on - strand at 296.966 kb on - strand at 297.035 kb on - strand, within GFF282 at 297.580 kb on + strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.581 kb on - strand at 297.617 kb on + strand at 297.698 kb on + strand at 297.699 kb on - strand at 297.699 kb on - strand at 297.716 kb on + strand at 297.716 kb on + strand at 297.716 kb on + strand at 297.717 kb on - strand at 297.717 kb on - strand at 297.717 kb on - strand at 298.010 kb on + strand, within GFF283 at 298.011 kb on - strand, within GFF283 at 298.364 kb on + strand, within GFF283 at 298.364 kb on + strand, within GFF283 at 298.364 kb on + strand, within GFF283 at 298.365 kb on - strand, within GFF283 at 298.365 kb on - strand, within GFF283 at 298.470 kb on + strand, within GFF283 at 298.470 kb on + strand, within GFF283 at 298.471 kb on - strand, within GFF283 at 298.471 kb on - strand, within GFF283 at 298.471 kb on - strand, within GFF283 at 298.471 kb on - strand, within GFF283 at 298.478 kb on + strand, within GFF283 at 298.478 kb on + strand, within GFF283 at 298.478 kb on + strand, within GFF283
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 296,835 + -0.4 296,835 + -0.3 296,836 - +0.2 296,965 + -1.1 296,965 + +0.1 296,966 - -0.2 296,966 - -0.4 297,035 - GFF282 0.17 -0.0 297,580 + +0.3 297,581 - -0.7 297,581 - -0.3 297,581 - -1.3 297,581 - -0.3 297,581 - -1.7 297,581 - -0.6 297,581 - -0.3 297,581 - -0.6 297,581 - -2.2 297,581 - +0.1 297,617 + +1.3 297,698 + +1.0 297,699 - +0.3 297,699 - -0.3 297,716 + +1.3 297,716 + -0.5 297,716 + +0.1 297,717 - -1.4 297,717 - -0.2 297,717 - -1.1 298,010 + GFF283 0.16 +0.4 298,011 - GFF283 0.16 +0.5 298,364 + GFF283 0.28 +1.1 298,364 + GFF283 0.28 -0.8 298,364 + GFF283 0.28 +0.8 298,365 - GFF283 0.28 +1.2 298,365 - GFF283 0.28 -0.4 298,470 + GFF283 0.32 -0.3 298,470 + GFF283 0.32 -0.3 298,471 - GFF283 0.32 +0.4 298,471 - GFF283 0.32 +0.2 298,471 - GFF283 0.32 +0.1 298,471 - GFF283 0.32 -0.2 298,478 + GFF283 0.32 -0.9 298,478 + GFF283 0.32 -0.2 298,478 + GFF283 0.32 +0.6
Or see this region's nucleotide sequence