Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2807 and GFF2808 are separated by 118 nucleotides GFF2808 and GFF2809 are separated by 160 nucleotides GFF2809 and GFF2810 are separated by 7 nucleotides
GFF2807 - N-ethylmaleimide reductase, at 513,905 to 515,053
GFF2807
GFF2808 - hypothetical protein, at 515,172 to 516,374
GFF2808
GFF2809 - hypothetical protein, at 516,535 to 516,981
GFF2809
GFF2810 - hypothetical protein, at 516,989 to 517,423
GFF2810
Position (kb) 515
516
517 Strain fitness (log2 ratio) -2
-1
0
1 at 514.283 kb on + strand, within GFF2807 at 514.284 kb on - strand, within GFF2807 at 514.295 kb on + strand, within GFF2807 at 514.295 kb on + strand, within GFF2807 at 514.295 kb on + strand, within GFF2807 at 514.344 kb on - strand, within GFF2807 at 514.436 kb on + strand, within GFF2807 at 514.437 kb on - strand, within GFF2807 at 514.934 kb on + strand, within GFF2807 at 514.934 kb on + strand, within GFF2807 at 514.935 kb on - strand, within GFF2807 at 514.935 kb on - strand, within GFF2807 at 514.955 kb on + strand at 514.955 kb on + strand at 514.955 kb on + strand at 514.956 kb on - strand at 514.956 kb on - strand at 515.162 kb on + strand at 515.163 kb on - strand at 515.248 kb on + strand at 515.248 kb on + strand at 515.248 kb on + strand at 515.248 kb on + strand at 515.249 kb on - strand at 515.249 kb on - strand at 515.452 kb on + strand, within GFF2808 at 515.452 kb on + strand, within GFF2808 at 515.749 kb on + strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.761 kb on + strand, within GFF2808 at 515.832 kb on - strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 516.355 kb on - strand at 516.365 kb on - strand at 516.365 kb on - strand at 516.401 kb on - strand at 516.401 kb on - strand at 516.604 kb on + strand, within GFF2809 at 516.604 kb on + strand, within GFF2809 at 516.604 kb on + strand, within GFF2809 at 516.604 kb on + strand, within GFF2809 at 516.605 kb on - strand, within GFF2809 at 516.658 kb on + strand, within GFF2809 at 516.659 kb on - strand, within GFF2809 at 516.790 kb on + strand, within GFF2809 at 516.837 kb on - strand, within GFF2809 at 517.352 kb on - strand, within GFF2810 at 517.352 kb on - strand, within GFF2810 at 517.353 kb on + strand, within GFF2810 at 517.354 kb on - strand, within GFF2810 at 517.354 kb on - strand, within GFF2810
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 514,283 + GFF2807 0.33 +1.4 514,284 - GFF2807 0.33 +0.1 514,295 + GFF2807 0.34 -0.7 514,295 + GFF2807 0.34 +1.0 514,295 + GFF2807 0.34 -0.2 514,344 - GFF2807 0.38 -0.4 514,436 + GFF2807 0.46 -0.9 514,437 - GFF2807 0.46 -0.0 514,934 + GFF2807 0.90 -0.5 514,934 + GFF2807 0.90 +0.3 514,935 - GFF2807 0.90 +0.2 514,935 - GFF2807 0.90 +0.3 514,955 + +0.5 514,955 + +0.2 514,955 + +0.0 514,956 - -0.6 514,956 - -1.3 515,162 + -0.1 515,163 - -1.0 515,248 + +1.1 515,248 + +0.1 515,248 + +0.7 515,248 + +0.1 515,249 - -2.4 515,249 - -0.7 515,452 + GFF2808 0.23 +0.5 515,452 + GFF2808 0.23 -1.3 515,749 + GFF2808 0.48 +0.6 515,750 - GFF2808 0.48 +1.0 515,750 - GFF2808 0.48 -1.3 515,750 - GFF2808 0.48 +0.7 515,750 - GFF2808 0.48 +1.0 515,761 + GFF2808 0.49 -1.2 515,832 - GFF2808 0.55 -0.4 515,944 + GFF2808 0.64 +0.7 515,944 + GFF2808 0.64 +0.9 515,944 + GFF2808 0.64 -0.7 516,355 - -1.6 516,365 - -0.3 516,365 - +0.3 516,401 - -0.1 516,401 - -0.1 516,604 + GFF2809 0.15 -1.8 516,604 + GFF2809 0.15 +0.3 516,604 + GFF2809 0.15 +0.3 516,604 + GFF2809 0.15 +0.3 516,605 - GFF2809 0.16 +0.3 516,658 + GFF2809 0.28 -0.7 516,659 - GFF2809 0.28 +0.5 516,790 + GFF2809 0.57 +0.9 516,837 - GFF2809 0.68 +1.0 517,352 - GFF2810 0.83 +0.1 517,352 - GFF2810 0.83 +0.3 517,353 + GFF2810 0.84 -1.2 517,354 - GFF2810 0.84 +0.3 517,354 - GFF2810 0.84 -0.1
Or see this region's nucleotide sequence