Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2791 and GFF2792 are separated by 182 nucleotides GFF2792 and GFF2793 are separated by 209 nucleotides
GFF2791 - hypothetical protein, at 494,591 to 495,340
GFF2791
GFF2792 - 2-(R)-hydroxypropyl-CoM dehydrogenase, at 495,523 to 496,323
GFF2792
GFF2793 - ATP-dependent RNA helicase DeaD, at 496,533 to 498,413
GFF2793
Position (kb) 495
496
497 Strain fitness (log2 ratio) -2
-1
0
1
2 at 494.799 kb on + strand, within GFF2791 at 494.799 kb on + strand, within GFF2791 at 494.799 kb on + strand, within GFF2791 at 494.799 kb on + strand, within GFF2791 at 494.800 kb on - strand, within GFF2791 at 494.800 kb on - strand, within GFF2791 at 494.800 kb on - strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.069 kb on + strand, within GFF2791 at 495.069 kb on + strand, within GFF2791 at 495.104 kb on + strand, within GFF2791 at 495.105 kb on + strand, within GFF2791 at 495.105 kb on + strand, within GFF2791 at 495.105 kb on + strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.215 kb on + strand, within GFF2791 at 495.216 kb on - strand, within GFF2791 at 495.216 kb on - strand, within GFF2791 at 495.298 kb on + strand at 495.298 kb on + strand at 495.386 kb on + strand at 495.386 kb on + strand at 495.387 kb on - strand at 495.387 kb on - strand at 495.486 kb on - strand at 495.531 kb on + strand at 495.532 kb on - strand at 495.532 kb on - strand at 495.532 kb on - strand at 496.144 kb on + strand, within GFF2792 at 496.144 kb on + strand, within GFF2792 at 496.231 kb on + strand, within GFF2792 at 496.231 kb on + strand, within GFF2792 at 496.232 kb on - strand, within GFF2792 at 496.232 kb on - strand, within GFF2792 at 496.232 kb on - strand, within GFF2792 at 496.356 kb on - strand at 496.437 kb on + strand at 496.438 kb on - strand at 496.482 kb on + strand at 496.482 kb on + strand at 496.482 kb on + strand at 496.483 kb on - strand at 496.664 kb on - strand at 496.798 kb on + strand, within GFF2793
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 494,799 + GFF2791 0.28 -1.1 494,799 + GFF2791 0.28 -0.3 494,799 + GFF2791 0.28 -0.8 494,799 + GFF2791 0.28 -0.8 494,800 - GFF2791 0.28 +0.3 494,800 - GFF2791 0.28 -0.6 494,800 - GFF2791 0.28 -1.0 495,013 + GFF2791 0.56 +0.7 495,013 + GFF2791 0.56 +0.5 495,013 + GFF2791 0.56 +0.3 495,013 + GFF2791 0.56 +0.1 495,013 + GFF2791 0.56 -0.1 495,014 - GFF2791 0.56 -2.3 495,014 - GFF2791 0.56 -0.8 495,014 - GFF2791 0.56 -1.4 495,014 - GFF2791 0.56 +1.3 495,014 - GFF2791 0.56 +1.0 495,014 - GFF2791 0.56 -0.5 495,014 - GFF2791 0.56 -0.7 495,014 - GFF2791 0.56 +0.7 495,014 - GFF2791 0.56 -0.2 495,069 + GFF2791 0.64 -0.6 495,069 + GFF2791 0.64 -1.3 495,104 + GFF2791 0.68 -1.1 495,105 + GFF2791 0.69 -1.1 495,105 + GFF2791 0.69 +0.6 495,105 + GFF2791 0.69 -1.9 495,106 - GFF2791 0.69 -0.5 495,106 - GFF2791 0.69 -0.7 495,106 - GFF2791 0.69 +0.6 495,106 - GFF2791 0.69 +1.9 495,106 - GFF2791 0.69 -1.3 495,215 + GFF2791 0.83 -1.8 495,216 - GFF2791 0.83 +1.1 495,216 - GFF2791 0.83 -0.4 495,298 + -0.3 495,298 + -0.7 495,386 + -0.1 495,386 + +0.2 495,387 - +0.6 495,387 - +1.3 495,486 - -0.3 495,531 + -1.2 495,532 - -0.7 495,532 - +0.2 495,532 - +0.2 496,144 + GFF2792 0.78 +0.8 496,144 + GFF2792 0.78 -0.5 496,231 + GFF2792 0.88 -2.1 496,231 + GFF2792 0.88 -0.6 496,232 - GFF2792 0.89 -0.6 496,232 - GFF2792 0.89 +0.7 496,232 - GFF2792 0.89 -0.5 496,356 - -0.2 496,437 + -0.9 496,438 - -0.9 496,482 + -1.4 496,482 + -0.1 496,482 + -0.1 496,483 - +0.1 496,664 - +0.5 496,798 + GFF2793 0.14 +0.5
Or see this region's nucleotide sequence