Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2790 and GFF2791 are separated by 240 nucleotides GFF2791 and GFF2792 are separated by 182 nucleotides
GFF2790 - N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase, at 493,046 to 494,350
GFF2790
GFF2791 - hypothetical protein, at 494,591 to 495,340
GFF2791
GFF2792 - 2-(R)-hydroxypropyl-CoM dehydrogenase, at 495,523 to 496,323
GFF2792
Position (kb) 494
495
496 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 493.770 kb on + strand, within GFF2790 at 493.770 kb on + strand, within GFF2790 at 493.771 kb on - strand, within GFF2790 at 493.771 kb on - strand, within GFF2790 at 493.845 kb on + strand, within GFF2790 at 493.846 kb on - strand, within GFF2790 at 493.953 kb on + strand, within GFF2790 at 493.953 kb on + strand, within GFF2790 at 493.954 kb on - strand, within GFF2790 at 494.031 kb on + strand, within GFF2790 at 494.093 kb on + strand, within GFF2790 at 494.799 kb on + strand, within GFF2791 at 494.799 kb on + strand, within GFF2791 at 494.799 kb on + strand, within GFF2791 at 494.799 kb on + strand, within GFF2791 at 494.800 kb on - strand, within GFF2791 at 494.800 kb on - strand, within GFF2791 at 494.800 kb on - strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.013 kb on + strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.014 kb on - strand, within GFF2791 at 495.069 kb on + strand, within GFF2791 at 495.069 kb on + strand, within GFF2791 at 495.104 kb on + strand, within GFF2791 at 495.105 kb on + strand, within GFF2791 at 495.105 kb on + strand, within GFF2791 at 495.105 kb on + strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.106 kb on - strand, within GFF2791 at 495.215 kb on + strand, within GFF2791 at 495.216 kb on - strand, within GFF2791 at 495.216 kb on - strand, within GFF2791 at 495.298 kb on + strand at 495.298 kb on + strand at 495.386 kb on + strand at 495.386 kb on + strand at 495.387 kb on - strand at 495.387 kb on - strand at 495.486 kb on - strand at 495.531 kb on + strand at 495.532 kb on - strand at 495.532 kb on - strand at 495.532 kb on - strand at 496.144 kb on + strand, within GFF2792 at 496.144 kb on + strand, within GFF2792 at 496.231 kb on + strand, within GFF2792 at 496.231 kb on + strand, within GFF2792 at 496.232 kb on - strand, within GFF2792 at 496.232 kb on - strand, within GFF2792 at 496.232 kb on - strand, within GFF2792
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 493,770 + GFF2790 0.55 -0.5 493,770 + GFF2790 0.55 -2.9 493,771 - GFF2790 0.56 +0.3 493,771 - GFF2790 0.56 -1.0 493,845 + GFF2790 0.61 +0.3 493,846 - GFF2790 0.61 +0.1 493,953 + GFF2790 0.70 -0.1 493,953 + GFF2790 0.70 -0.5 493,954 - GFF2790 0.70 -0.8 494,031 + GFF2790 0.75 -0.7 494,093 + GFF2790 0.80 -0.2 494,799 + GFF2791 0.28 -1.1 494,799 + GFF2791 0.28 -0.3 494,799 + GFF2791 0.28 -0.8 494,799 + GFF2791 0.28 -0.8 494,800 - GFF2791 0.28 +0.3 494,800 - GFF2791 0.28 -0.6 494,800 - GFF2791 0.28 -1.0 495,013 + GFF2791 0.56 +0.7 495,013 + GFF2791 0.56 +0.5 495,013 + GFF2791 0.56 +0.3 495,013 + GFF2791 0.56 +0.1 495,013 + GFF2791 0.56 -0.1 495,014 - GFF2791 0.56 -2.3 495,014 - GFF2791 0.56 -0.8 495,014 - GFF2791 0.56 -1.4 495,014 - GFF2791 0.56 +1.3 495,014 - GFF2791 0.56 +1.0 495,014 - GFF2791 0.56 -0.5 495,014 - GFF2791 0.56 -0.7 495,014 - GFF2791 0.56 +0.7 495,014 - GFF2791 0.56 -0.2 495,069 + GFF2791 0.64 -0.6 495,069 + GFF2791 0.64 -1.3 495,104 + GFF2791 0.68 -1.1 495,105 + GFF2791 0.69 -1.1 495,105 + GFF2791 0.69 +0.6 495,105 + GFF2791 0.69 -1.9 495,106 - GFF2791 0.69 -0.5 495,106 - GFF2791 0.69 -0.7 495,106 - GFF2791 0.69 +0.6 495,106 - GFF2791 0.69 +1.9 495,106 - GFF2791 0.69 -1.3 495,215 + GFF2791 0.83 -1.8 495,216 - GFF2791 0.83 +1.1 495,216 - GFF2791 0.83 -0.4 495,298 + -0.3 495,298 + -0.7 495,386 + -0.1 495,386 + +0.2 495,387 - +0.6 495,387 - +1.3 495,486 - -0.3 495,531 + -1.2 495,532 - -0.7 495,532 - +0.2 495,532 - +0.2 496,144 + GFF2792 0.78 +0.8 496,144 + GFF2792 0.78 -0.5 496,231 + GFF2792 0.88 -2.1 496,231 + GFF2792 0.88 -0.6 496,232 - GFF2792 0.89 -0.6 496,232 - GFF2792 0.89 +0.7 496,232 - GFF2792 0.89 -0.5
Or see this region's nucleotide sequence