Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF276 and GFF277 are separated by 203 nucleotides GFF277 and GFF278 overlap by 4 nucleotides GFF278 and GFF279 are separated by 117 nucleotides
GFF276 - Manganese transport system membrane protein MntB, at 291,456 to 292,328
GFF276
GFF277 - Manganese import ATP-binding protein ScaC, at 292,532 to 293,272
GFF277
GFF278 - hypothetical protein, at 293,269 to 293,571
GFF278
GFF279 - Allophanate hydrolase, at 293,689 to 295,473
GFF279
Position (kb) 292
293
294 Strain fitness (log2 ratio) -1
0
1 at 292.013 kb on - strand, within GFF276 at 292.013 kb on - strand, within GFF276 at 292.318 kb on + strand at 292.318 kb on + strand at 292.319 kb on - strand at 293.007 kb on + strand, within GFF277 at 293.008 kb on - strand, within GFF277 at 293.056 kb on - strand, within GFF277 at 293.691 kb on - strand at 293.964 kb on - strand, within GFF279 at 293.964 kb on - strand, within GFF279 at 294.158 kb on + strand, within GFF279 at 294.158 kb on + strand, within GFF279 at 294.159 kb on - strand, within GFF279 at 294.221 kb on + strand, within GFF279 at 294.221 kb on + strand, within GFF279 at 294.222 kb on - strand, within GFF279 at 294.222 kb on - strand, within GFF279
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 292,013 - GFF276 0.64 -1.0 292,013 - GFF276 0.64 -0.9 292,318 + -0.3 292,318 + -1.2 292,319 - -1.6 293,007 + GFF277 0.64 -1.0 293,008 - GFF277 0.64 -0.0 293,056 - GFF277 0.71 +0.4 293,691 - -1.0 293,964 - GFF279 0.15 -0.1 293,964 - GFF279 0.15 +1.3 294,158 + GFF279 0.26 +0.1 294,158 + GFF279 0.26 -0.5 294,159 - GFF279 0.26 -0.6 294,221 + GFF279 0.30 -1.0 294,221 + GFF279 0.30 -0.2 294,222 - GFF279 0.30 -0.2 294,222 - GFF279 0.30 +0.2
Or see this region's nucleotide sequence