Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2767 and GFF2768 are separated by 40 nucleotides GFF2768 and GFF2769 overlap by 4 nucleotides
GFF2767 - Glyoxylate/hydroxypyruvate reductase B, at 468,586 to 469,641
GFF2767
GFF2768 - (Z)-2-((N-methylformamido)methylene)-5-hydroxybut yrolactone dehydrogenase, at 469,682 to 471,157
GFF2768
GFF2769 - Fumarate reductase flavoprotein subunit, at 471,154 to 472,596
GFF2769
Position (kb) 469
470
471
472 Strain fitness (log2 ratio) -1
0
1
2 at 469.090 kb on - strand, within GFF2767 at 469.501 kb on + strand, within GFF2767 at 469.502 kb on - strand, within GFF2767 at 469.502 kb on - strand, within GFF2767 at 469.502 kb on - strand, within GFF2767 at 469.691 kb on + strand at 469.691 kb on + strand at 469.691 kb on + strand at 469.691 kb on + strand at 469.692 kb on - strand at 469.692 kb on - strand at 469.692 kb on - strand at 469.760 kb on + strand at 470.010 kb on - strand, within GFF2768 at 470.010 kb on - strand, within GFF2768 at 470.074 kb on + strand, within GFF2768 at 470.074 kb on + strand, within GFF2768 at 470.075 kb on - strand, within GFF2768 at 470.084 kb on + strand, within GFF2768 at 470.084 kb on + strand, within GFF2768 at 470.085 kb on - strand, within GFF2768 at 470.085 kb on - strand, within GFF2768 at 470.564 kb on + strand, within GFF2768 at 470.564 kb on + strand, within GFF2768 at 470.565 kb on - strand, within GFF2768 at 470.577 kb on + strand, within GFF2768 at 470.577 kb on + strand, within GFF2768 at 470.577 kb on + strand, within GFF2768 at 470.578 kb on - strand, within GFF2768 at 470.578 kb on - strand, within GFF2768 at 470.906 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.995 kb on + strand, within GFF2768 at 470.996 kb on - strand, within GFF2768 at 470.996 kb on - strand, within GFF2768 at 470.999 kb on + strand, within GFF2768 at 471.126 kb on - strand at 471.153 kb on + strand at 471.153 kb on + strand at 471.153 kb on + strand at 471.154 kb on - strand at 471.154 kb on - strand at 471.154 kb on - strand at 471.418 kb on + strand, within GFF2769 at 471.553 kb on + strand, within GFF2769 at 471.553 kb on + strand, within GFF2769 at 471.554 kb on - strand, within GFF2769 at 471.554 kb on - strand, within GFF2769 at 471.554 kb on - strand, within GFF2769 at 471.554 kb on - strand, within GFF2769 at 471.554 kb on - strand, within GFF2769 at 471.808 kb on + strand, within GFF2769 at 471.812 kb on - strand, within GFF2769 at 471.830 kb on - strand, within GFF2769 at 471.832 kb on - strand, within GFF2769 at 471.857 kb on - strand, within GFF2769 at 471.857 kb on - strand, within GFF2769 at 471.860 kb on - strand, within GFF2769 at 471.928 kb on + strand, within GFF2769 at 472.054 kb on - strand, within GFF2769 at 472.054 kb on - strand, within GFF2769 at 472.061 kb on - strand, within GFF2769 at 472.108 kb on + strand, within GFF2769 at 472.108 kb on + strand, within GFF2769 at 472.108 kb on + strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.109 kb on - strand, within GFF2769 at 472.109 kb on - strand, within GFF2769
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 469,090 - GFF2767 0.48 -0.5 469,501 + GFF2767 0.87 +0.4 469,502 - GFF2767 0.87 -0.4 469,502 - GFF2767 0.87 +0.3 469,502 - GFF2767 0.87 -1.3 469,691 + -0.4 469,691 + +0.3 469,691 + +0.5 469,691 + +0.3 469,692 - +0.6 469,692 - -0.9 469,692 - -0.2 469,760 + +0.8 470,010 - GFF2768 0.22 +0.3 470,010 - GFF2768 0.22 -0.2 470,074 + GFF2768 0.27 +1.3 470,074 + GFF2768 0.27 -1.6 470,075 - GFF2768 0.27 +0.8 470,084 + GFF2768 0.27 +0.4 470,084 + GFF2768 0.27 -0.8 470,085 - GFF2768 0.27 -0.3 470,085 - GFF2768 0.27 -0.3 470,564 + GFF2768 0.60 -0.5 470,564 + GFF2768 0.60 +0.9 470,565 - GFF2768 0.60 -1.1 470,577 + GFF2768 0.61 -0.3 470,577 + GFF2768 0.61 +0.4 470,577 + GFF2768 0.61 +0.5 470,578 - GFF2768 0.61 +1.1 470,578 - GFF2768 0.61 +0.1 470,906 + GFF2768 0.83 -1.7 470,995 + GFF2768 0.89 +0.1 470,995 + GFF2768 0.89 +0.4 470,995 + GFF2768 0.89 -0.4 470,995 + GFF2768 0.89 -1.1 470,995 + GFF2768 0.89 +0.8 470,995 + GFF2768 0.89 -0.4 470,995 + GFF2768 0.89 +0.8 470,995 + GFF2768 0.89 +0.7 470,995 + GFF2768 0.89 -0.9 470,995 + GFF2768 0.89 +0.8 470,996 - GFF2768 0.89 +0.1 470,996 - GFF2768 0.89 +0.2 470,999 + GFF2768 0.89 +0.2 471,126 - +0.4 471,153 + +0.0 471,153 + -0.5 471,153 + -0.7 471,154 - +0.7 471,154 - -0.4 471,154 - +0.8 471,418 + GFF2769 0.18 +0.8 471,553 + GFF2769 0.28 -0.2 471,553 + GFF2769 0.28 +2.3 471,554 - GFF2769 0.28 -0.6 471,554 - GFF2769 0.28 +0.1 471,554 - GFF2769 0.28 +0.3 471,554 - GFF2769 0.28 -0.0 471,554 - GFF2769 0.28 +0.3 471,808 + GFF2769 0.45 -0.5 471,812 - GFF2769 0.46 +0.3 471,830 - GFF2769 0.47 +0.8 471,832 - GFF2769 0.47 -0.9 471,857 - GFF2769 0.49 -0.2 471,857 - GFF2769 0.49 +0.3 471,860 - GFF2769 0.49 -0.3 471,928 + GFF2769 0.54 +0.8 472,054 - GFF2769 0.62 -0.2 472,054 - GFF2769 0.62 -0.1 472,061 - GFF2769 0.63 +0.5 472,108 + GFF2769 0.66 -0.1 472,108 + GFF2769 0.66 -0.5 472,108 + GFF2769 0.66 +1.8 472,109 - GFF2769 0.66 -0.6 472,109 - GFF2769 0.66 -0.2 472,109 - GFF2769 0.66 +0.9 472,109 - GFF2769 0.66 +0.5
Or see this region's nucleotide sequence