Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2721 and GFF2722 are separated by 150 nucleotides GFF2722 and GFF2723 are separated by 341 nucleotides
GFF2721 - hypothetical protein, at 414,368 to 415,429
GFF2721
GFF2722 - hypothetical protein, at 415,580 to 416,239
GFF2722
GFF2723 - D-galactarolactone cycloisomerase, at 416,581 to 417,684
GFF2723
Position (kb) 415
416
417 Strain fitness (log2 ratio) -2
-1
0
1 at 414.598 kb on - strand, within GFF2721 at 414.598 kb on - strand, within GFF2721 at 414.825 kb on + strand, within GFF2721 at 415.317 kb on + strand, within GFF2721 at 415.317 kb on + strand, within GFF2721 at 415.317 kb on + strand, within GFF2721 at 415.318 kb on - strand, within GFF2721 at 415.318 kb on - strand, within GFF2721 at 415.318 kb on - strand, within GFF2721 at 415.365 kb on + strand at 415.366 kb on - strand at 415.366 kb on - strand at 415.366 kb on - strand at 415.544 kb on - strand at 415.544 kb on - strand at 415.804 kb on + strand, within GFF2722 at 415.804 kb on + strand, within GFF2722 at 415.804 kb on + strand, within GFF2722 at 415.805 kb on - strand, within GFF2722 at 415.890 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 416.322 kb on - strand at 416.340 kb on + strand at 416.341 kb on - strand at 416.341 kb on - strand at 416.388 kb on + strand at 416.389 kb on - strand at 416.486 kb on + strand at 416.558 kb on + strand at 416.807 kb on + strand, within GFF2723 at 416.878 kb on + strand, within GFF2723 at 416.882 kb on + strand, within GFF2723 at 416.927 kb on - strand, within GFF2723 at 416.968 kb on + strand, within GFF2723 at 416.968 kb on + strand, within GFF2723 at 416.969 kb on - strand, within GFF2723 at 416.969 kb on - strand, within GFF2723 at 417.120 kb on + strand, within GFF2723
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 414,598 - GFF2721 0.22 -1.2 414,598 - GFF2721 0.22 -0.9 414,825 + GFF2721 0.43 -0.5 415,317 + GFF2721 0.89 +0.5 415,317 + GFF2721 0.89 +1.4 415,317 + GFF2721 0.89 -0.9 415,318 - GFF2721 0.89 +0.5 415,318 - GFF2721 0.89 -0.5 415,318 - GFF2721 0.89 +0.2 415,365 + -0.8 415,366 - -0.5 415,366 - +0.5 415,366 - +0.4 415,544 - -0.7 415,544 - -0.3 415,804 + GFF2722 0.34 +0.1 415,804 + GFF2722 0.34 +1.1 415,804 + GFF2722 0.34 +0.2 415,805 - GFF2722 0.34 -0.1 415,890 + GFF2722 0.47 -1.8 415,974 + GFF2722 0.60 -0.1 415,974 + GFF2722 0.60 -0.3 415,974 + GFF2722 0.60 +1.4 415,974 + GFF2722 0.60 -2.6 415,974 + GFF2722 0.60 +0.3 415,974 + GFF2722 0.60 +0.7 415,974 + GFF2722 0.60 -0.1 415,974 + GFF2722 0.60 -0.7 415,974 + GFF2722 0.60 -0.4 415,974 + GFF2722 0.60 +0.8 415,975 - GFF2722 0.60 +0.6 415,975 - GFF2722 0.60 -1.1 415,975 - GFF2722 0.60 -1.4 415,975 - GFF2722 0.60 -0.9 416,322 - +0.0 416,340 + -0.2 416,341 - +0.9 416,341 - +0.1 416,388 + +0.3 416,389 - -0.7 416,486 + -0.4 416,558 + +0.0 416,807 + GFF2723 0.20 -0.6 416,878 + GFF2723 0.27 -0.3 416,882 + GFF2723 0.27 -0.4 416,927 - GFF2723 0.31 +0.9 416,968 + GFF2723 0.35 +0.4 416,968 + GFF2723 0.35 -0.2 416,969 - GFF2723 0.35 +0.6 416,969 - GFF2723 0.35 +0.4 417,120 + GFF2723 0.49 -0.7
Or see this region's nucleotide sequence