Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF263 and GFF264 are separated by 202 nucleotides GFF264 and GFF265 are separated by 401 nucleotides GFF265 and GFF266 overlap by 4 nucleotides GFF266 and GFF267 overlap by 4 nucleotides
GFF263 - hypothetical protein, at 278,115 to 278,846
GFF263
GFF264 - hypothetical protein, at 279,049 to 279,366
GFF264
GFF265 - Cysteine--tRNA ligase, at 279,768 to 281,156
GFF265
GFF266 - putative N-acetyltransferase YafP, at 281,153 to 281,641
GFF266
GFF267 - (R)-citramalate synthase, at 281,638 to 283,251
GFF267
Position (kb) 279
280
281
282 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 278.931 kb on - strand at 278.931 kb on - strand at 278.931 kb on - strand at 279.168 kb on - strand, within GFF264 at 279.182 kb on + strand, within GFF264 at 279.182 kb on + strand, within GFF264 at 279.388 kb on - strand at 279.388 kb on - strand at 279.388 kb on - strand at 279.519 kb on + strand at 279.519 kb on + strand at 279.520 kb on - strand at 279.644 kb on + strand at 279.695 kb on + strand at 281.177 kb on + strand at 281.178 kb on - strand at 281.178 kb on - strand at 281.405 kb on + strand, within GFF266 at 281.405 kb on + strand, within GFF266 at 281.405 kb on + strand, within GFF266 at 281.405 kb on + strand, within GFF266 at 281.405 kb on + strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.406 kb on - strand, within GFF266 at 281.674 kb on + strand at 281.674 kb on + strand at 281.674 kb on + strand at 281.686 kb on - strand at 281.713 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.782 kb on + strand at 281.783 kb on - strand at 281.783 kb on - strand at 281.783 kb on - strand at 281.783 kb on - strand at 281.783 kb on - strand at 281.978 kb on - strand, within GFF267 at 281.978 kb on - strand, within GFF267 at 282.149 kb on - strand, within GFF267
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 278,931 - -0.9 278,931 - +0.5 278,931 - -0.4 279,168 - GFF264 0.37 -0.6 279,182 + GFF264 0.42 -1.6 279,182 + GFF264 0.42 +0.8 279,388 - -0.7 279,388 - -0.4 279,388 - -0.3 279,519 + -0.1 279,519 + -0.8 279,520 - -1.3 279,644 + -0.9 279,695 + -0.7 281,177 + +0.7 281,178 - -3.4 281,178 - -2.6 281,405 + GFF266 0.52 +0.1 281,405 + GFF266 0.52 +0.4 281,405 + GFF266 0.52 +1.0 281,405 + GFF266 0.52 -1.0 281,405 + GFF266 0.52 +0.4 281,406 - GFF266 0.52 -0.5 281,406 - GFF266 0.52 -2.7 281,406 - GFF266 0.52 -0.9 281,406 - GFF266 0.52 -2.4 281,406 - GFF266 0.52 -1.2 281,406 - GFF266 0.52 -2.4 281,406 - GFF266 0.52 -0.0 281,674 + -2.9 281,674 + -3.0 281,674 + -3.3 281,686 - -2.0 281,713 + -3.2 281,782 + -2.0 281,782 + -0.2 281,782 + -2.0 281,782 + -1.0 281,782 + -1.4 281,782 + -2.8 281,782 + -1.8 281,782 + -2.1 281,783 - -1.6 281,783 - -1.0 281,783 - -1.4 281,783 - -3.6 281,783 - -2.8 281,978 - GFF267 0.21 -2.3 281,978 - GFF267 0.21 -2.7 282,149 - GFF267 0.32 -1.3
Or see this region's nucleotide sequence