Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2612 and GFF2613 overlap by 4 nucleotides GFF2613 and GFF2614 overlap by 4 nucleotides GFF2614 and GFF2615 overlap by 4 nucleotides GFF2615 and GFF2616 are separated by 45 nucleotides
GFF2612 - Chromosome-partitioning ATPase Soj, at 295,811 to 296,464
GFF2612
GFF2613 - hypothetical protein, at 296,461 to 296,712
GFF2613
GFF2614 - hypothetical protein, at 296,709 to 297,239
GFF2614
GFF2615 - hypothetical protein, at 297,236 to 297,781
GFF2615
GFF2616 - hypothetical protein, at 297,827 to 298,612
GFF2616
Position (kb) 297
298 Strain fitness (log2 ratio) -2
-1
0
1 at 296.569 kb on - strand, within GFF2613 at 296.998 kb on - strand, within GFF2614 at 296.998 kb on - strand, within GFF2614 at 297.099 kb on - strand, within GFF2614 at 297.186 kb on + strand, within GFF2614 at 297.186 kb on + strand, within GFF2614 at 297.186 kb on + strand, within GFF2614 at 297.187 kb on - strand at 297.187 kb on - strand at 297.266 kb on + strand at 297.266 kb on + strand at 297.266 kb on + strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.359 kb on + strand, within GFF2615 at 297.359 kb on + strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.452 kb on + strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.552 kb on - strand, within GFF2615 at 297.677 kb on + strand, within GFF2615 at 297.678 kb on - strand, within GFF2615 at 297.729 kb on - strand at 298.175 kb on + strand, within GFF2616 at 298.176 kb on - strand, within GFF2616 at 298.232 kb on + strand, within GFF2616 at 298.232 kb on + strand, within GFF2616 at 298.256 kb on + strand, within GFF2616 at 298.283 kb on + strand, within GFF2616 at 298.283 kb on + strand, within GFF2616 at 298.284 kb on - strand, within GFF2616 at 298.284 kb on - strand, within GFF2616 at 298.284 kb on - strand, within GFF2616 at 298.284 kb on - strand, within GFF2616 at 298.284 kb on - strand, within GFF2616 at 298.632 kb on + strand at 298.632 kb on + strand at 298.632 kb on + strand at 298.633 kb on - strand at 298.633 kb on - strand at 298.633 kb on - strand at 298.633 kb on - strand at 298.707 kb on + strand at 298.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 296,569 - GFF2613 0.43 +0.2 296,998 - GFF2614 0.54 -0.3 296,998 - GFF2614 0.54 -0.0 297,099 - GFF2614 0.73 -0.0 297,186 + GFF2614 0.90 -0.4 297,186 + GFF2614 0.90 +0.2 297,186 + GFF2614 0.90 +0.6 297,187 - -2.2 297,187 - +1.3 297,266 + -1.6 297,266 + -0.3 297,266 + +0.4 297,267 - +1.1 297,267 - +0.6 297,267 - +0.6 297,267 - -0.9 297,267 - -0.9 297,359 + GFF2615 0.23 +0.1 297,359 + GFF2615 0.23 +0.4 297,360 - GFF2615 0.23 +0.2 297,360 - GFF2615 0.23 -1.2 297,360 - GFF2615 0.23 +1.1 297,360 - GFF2615 0.23 -0.4 297,360 - GFF2615 0.23 +0.7 297,360 - GFF2615 0.23 -1.9 297,452 + GFF2615 0.40 -0.6 297,453 - GFF2615 0.40 +0.1 297,453 - GFF2615 0.40 -0.1 297,453 - GFF2615 0.40 -1.7 297,453 - GFF2615 0.40 +0.0 297,552 - GFF2615 0.58 +1.6 297,677 + GFF2615 0.81 -0.8 297,678 - GFF2615 0.81 -0.3 297,729 - -1.4 298,175 + GFF2616 0.44 +0.9 298,176 - GFF2616 0.44 -0.7 298,232 + GFF2616 0.52 +1.0 298,232 + GFF2616 0.52 -0.2 298,256 + GFF2616 0.55 +1.3 298,283 + GFF2616 0.58 -0.7 298,283 + GFF2616 0.58 -0.3 298,284 - GFF2616 0.58 -0.2 298,284 - GFF2616 0.58 +0.3 298,284 - GFF2616 0.58 +0.5 298,284 - GFF2616 0.58 +0.2 298,284 - GFF2616 0.58 +0.4 298,632 + -0.9 298,632 + -1.5 298,632 + +0.1 298,633 - -1.4 298,633 - +0.4 298,633 - -0.1 298,633 - -1.6 298,707 + +1.0 298,755 + +1.5
Or see this region's nucleotide sequence