Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2611 and GFF2612 overlap by 4 nucleotides GFF2612 and GFF2613 overlap by 4 nucleotides GFF2613 and GFF2614 overlap by 4 nucleotides GFF2614 and GFF2615 overlap by 4 nucleotides
GFF2611 - hypothetical protein, at 294,675 to 295,814
GFF2611
GFF2612 - Chromosome-partitioning ATPase Soj, at 295,811 to 296,464
GFF2612
GFF2613 - hypothetical protein, at 296,461 to 296,712
GFF2613
GFF2614 - hypothetical protein, at 296,709 to 297,239
GFF2614
GFF2615 - hypothetical protein, at 297,236 to 297,781
GFF2615
Position (kb) 296
297 Strain fitness (log2 ratio) -2
-1
0
1 at 295.618 kb on + strand, within GFF2611 at 295.632 kb on - strand, within GFF2611 at 295.637 kb on - strand, within GFF2611 at 295.643 kb on + strand, within GFF2611 at 295.644 kb on - strand, within GFF2611 at 295.644 kb on - strand, within GFF2611 at 295.686 kb on - strand, within GFF2611 at 295.689 kb on + strand, within GFF2611 at 295.689 kb on + strand, within GFF2611 at 295.745 kb on - strand at 296.205 kb on - strand, within GFF2612 at 296.569 kb on - strand, within GFF2613 at 296.998 kb on - strand, within GFF2614 at 296.998 kb on - strand, within GFF2614 at 297.099 kb on - strand, within GFF2614 at 297.186 kb on + strand, within GFF2614 at 297.186 kb on + strand, within GFF2614 at 297.186 kb on + strand, within GFF2614 at 297.187 kb on - strand at 297.187 kb on - strand at 297.266 kb on + strand at 297.266 kb on + strand at 297.266 kb on + strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.267 kb on - strand at 297.359 kb on + strand, within GFF2615 at 297.359 kb on + strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.360 kb on - strand, within GFF2615 at 297.452 kb on + strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.453 kb on - strand, within GFF2615 at 297.552 kb on - strand, within GFF2615 at 297.677 kb on + strand, within GFF2615 at 297.678 kb on - strand, within GFF2615
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 295,618 + GFF2611 0.83 +0.3 295,632 - GFF2611 0.84 +0.8 295,637 - GFF2611 0.84 -1.1 295,643 + GFF2611 0.85 -1.6 295,644 - GFF2611 0.85 -0.7 295,644 - GFF2611 0.85 +0.2 295,686 - GFF2611 0.89 +0.1 295,689 + GFF2611 0.89 +0.2 295,689 + GFF2611 0.89 -0.6 295,745 - +0.3 296,205 - GFF2612 0.60 +1.1 296,569 - GFF2613 0.43 +0.2 296,998 - GFF2614 0.54 -0.3 296,998 - GFF2614 0.54 -0.0 297,099 - GFF2614 0.73 -0.0 297,186 + GFF2614 0.90 -0.4 297,186 + GFF2614 0.90 +0.2 297,186 + GFF2614 0.90 +0.6 297,187 - -2.2 297,187 - +1.3 297,266 + -1.6 297,266 + -0.3 297,266 + +0.4 297,267 - +1.1 297,267 - +0.6 297,267 - +0.6 297,267 - -0.9 297,267 - -0.9 297,359 + GFF2615 0.23 +0.1 297,359 + GFF2615 0.23 +0.4 297,360 - GFF2615 0.23 +0.2 297,360 - GFF2615 0.23 -1.2 297,360 - GFF2615 0.23 +1.1 297,360 - GFF2615 0.23 -0.4 297,360 - GFF2615 0.23 +0.7 297,360 - GFF2615 0.23 -1.9 297,452 + GFF2615 0.40 -0.6 297,453 - GFF2615 0.40 +0.1 297,453 - GFF2615 0.40 -0.1 297,453 - GFF2615 0.40 -1.7 297,453 - GFF2615 0.40 +0.0 297,552 - GFF2615 0.58 +1.6 297,677 + GFF2615 0.81 -0.8 297,678 - GFF2615 0.81 -0.3
Or see this region's nucleotide sequence