Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2603 and GFF2604 are separated by 384 nucleotides GFF2604 and GFF2605 are separated by 137 nucleotides
GFF2603 - hypothetical protein, at 289,791 to 290,714
GFF2603
GFF2604 - hypothetical protein, at 291,099 to 291,266
GFF2604
GFF2605 - hypothetical protein, at 291,404 to 291,820
GFF2605
Position (kb) 291
292 Strain fitness (log2 ratio) -2
-1
0
1 at 290.795 kb on - strand at 291.264 kb on + strand at 291.264 kb on + strand at 291.265 kb on - strand at 291.265 kb on - strand at 291.265 kb on - strand at 291.270 kb on - strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.276 kb on - strand at 291.276 kb on - strand at 291.276 kb on - strand at 291.276 kb on - strand at 291.333 kb on + strand at 291.333 kb on + strand at 291.334 kb on - strand at 291.338 kb on + strand at 291.447 kb on + strand, within GFF2605 at 291.448 kb on - strand, within GFF2605 at 291.467 kb on - strand, within GFF2605 at 291.524 kb on + strand, within GFF2605 at 291.524 kb on + strand, within GFF2605 at 291.524 kb on + strand, within GFF2605 at 291.525 kb on - strand, within GFF2605 at 291.684 kb on - strand, within GFF2605 at 291.684 kb on - strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.761 kb on - strand, within GFF2605
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 290,795 - -1.2 291,264 + +0.3 291,264 + -0.0 291,265 - +1.1 291,265 - +1.4 291,265 - -0.9 291,270 - -2.5 291,275 + +0.5 291,275 + -0.9 291,275 + -0.7 291,275 + -0.2 291,275 + +0.2 291,276 - -0.9 291,276 - +0.4 291,276 - +0.0 291,276 - -0.4 291,333 + +0.7 291,333 + +0.5 291,334 - +0.3 291,338 + +0.1 291,447 + GFF2605 0.10 +0.2 291,448 - GFF2605 0.11 -0.7 291,467 - GFF2605 0.15 +0.4 291,524 + GFF2605 0.29 -2.0 291,524 + GFF2605 0.29 -0.8 291,524 + GFF2605 0.29 -0.7 291,525 - GFF2605 0.29 +0.5 291,684 - GFF2605 0.67 +1.6 291,684 - GFF2605 0.67 -0.1 291,760 + GFF2605 0.85 +1.7 291,760 + GFF2605 0.85 -2.1 291,760 + GFF2605 0.85 -0.2 291,760 + GFF2605 0.85 -1.6 291,761 - GFF2605 0.86 +0.7
Or see this region's nucleotide sequence