Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF259 and GFF260 are separated by 172 nucleotides GFF260 and GFF261 are separated by 133 nucleotides
GFF259 - hypothetical protein, at 273,791 to 274,690
GFF259
GFF260 - hypothetical protein, at 274,863 to 276,071
GFF260
GFF261 - Alpha-keto acid-binding periplasmic protein TakP, at 276,205 to 277,299
GFF261
Position (kb) 274
275
276
277 Strain fitness (log2 ratio) -1
0
1 at 274.712 kb on - strand at 274.864 kb on + strand at 276.119 kb on - strand at 276.119 kb on - strand at 276.248 kb on + strand at 276.347 kb on + strand, within GFF261 at 276.369 kb on - strand, within GFF261 at 276.459 kb on - strand, within GFF261 at 276.459 kb on - strand, within GFF261 at 276.515 kb on + strand, within GFF261 at 276.516 kb on - strand, within GFF261 at 276.593 kb on + strand, within GFF261 at 276.594 kb on - strand, within GFF261 at 276.596 kb on + strand, within GFF261 at 276.596 kb on + strand, within GFF261 at 276.596 kb on + strand, within GFF261 at 276.597 kb on - strand, within GFF261 at 276.600 kb on - strand, within GFF261 at 276.602 kb on + strand, within GFF261 at 276.602 kb on + strand, within GFF261 at 276.602 kb on + strand, within GFF261 at 276.642 kb on - strand, within GFF261 at 276.870 kb on - strand, within GFF261 at 276.995 kb on + strand, within GFF261 at 276.996 kb on - strand, within GFF261 at 277.001 kb on + strand, within GFF261 at 277.001 kb on + strand, within GFF261 at 277.001 kb on + strand, within GFF261 at 277.001 kb on + strand, within GFF261
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 274,712 - +1.2 274,864 + -0.2 276,119 - +0.5 276,119 - -0.6 276,248 + -0.5 276,347 + GFF261 0.13 +0.6 276,369 - GFF261 0.15 -0.0 276,459 - GFF261 0.23 +0.5 276,459 - GFF261 0.23 +0.7 276,515 + GFF261 0.28 -1.2 276,516 - GFF261 0.28 -0.2 276,593 + GFF261 0.35 +0.9 276,594 - GFF261 0.36 +0.2 276,596 + GFF261 0.36 +1.6 276,596 + GFF261 0.36 +0.9 276,596 + GFF261 0.36 +0.6 276,597 - GFF261 0.36 -1.1 276,600 - GFF261 0.36 -0.5 276,602 + GFF261 0.36 +0.2 276,602 + GFF261 0.36 +0.1 276,602 + GFF261 0.36 -0.3 276,642 - GFF261 0.40 -1.3 276,870 - GFF261 0.61 +0.9 276,995 + GFF261 0.72 -0.4 276,996 - GFF261 0.72 +0.6 277,001 + GFF261 0.73 +1.2 277,001 + GFF261 0.73 -0.6 277,001 + GFF261 0.73 +0.1 277,001 + GFF261 0.73 +0.2
Or see this region's nucleotide sequence