Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2573 and GFF2574 are separated by 170 nucleotides GFF2574 and GFF2575 are separated by 88 nucleotides GFF2575 and GFF2576 are separated by 7 nucleotides
GFF2573 - hypothetical protein, at 248,884 to 252,309
GFF2573
GFF2574 - putative protein, at 252,480 to 254,987
GFF2574
GFF2575 - putative protein, at 255,076 to 255,963
GFF2575
GFF2576 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 255,971 to 257,323
GFF2576
Position (kb) 252
253
254
255 Strain fitness (log2 ratio) -2
-1
0
1
2 at 251.665 kb on + strand, within GFF2573 at 251.666 kb on - strand, within GFF2573 at 251.666 kb on - strand, within GFF2573 at 251.666 kb on - strand, within GFF2573 at 251.666 kb on - strand, within GFF2573 at 251.666 kb on - strand, within GFF2573 at 251.666 kb on - strand, within GFF2573 at 251.716 kb on + strand, within GFF2573 at 251.716 kb on + strand, within GFF2573 at 251.775 kb on + strand, within GFF2573 at 251.775 kb on + strand, within GFF2573 at 251.776 kb on - strand, within GFF2573 at 251.872 kb on + strand, within GFF2573 at 251.872 kb on + strand, within GFF2573 at 251.872 kb on + strand, within GFF2573 at 251.873 kb on - strand, within GFF2573 at 251.992 kb on + strand at 251.992 kb on + strand at 251.992 kb on + strand at 251.992 kb on + strand at 251.992 kb on + strand at 251.992 kb on + strand at 251.992 kb on + strand at 251.992 kb on + strand at 251.993 kb on - strand at 251.993 kb on - strand at 251.993 kb on - strand at 251.993 kb on - strand at 251.993 kb on - strand at 252.010 kb on + strand at 252.011 kb on - strand at 252.011 kb on - strand at 252.121 kb on + strand at 252.121 kb on + strand at 252.122 kb on - strand at 252.122 kb on - strand at 252.124 kb on + strand at 252.124 kb on + strand at 252.124 kb on + strand at 252.124 kb on + strand at 252.124 kb on + strand at 252.125 kb on - strand at 252.125 kb on - strand at 252.125 kb on - strand at 252.125 kb on - strand at 252.125 kb on - strand at 252.151 kb on + strand at 252.151 kb on + strand at 252.152 kb on - strand at 252.152 kb on - strand at 252.175 kb on + strand at 252.408 kb on + strand at 252.409 kb on - strand at 252.439 kb on + strand at 252.684 kb on + strand at 252.685 kb on - strand at 252.717 kb on + strand at 252.717 kb on + strand at 252.812 kb on + strand, within GFF2574 at 252.812 kb on + strand, within GFF2574 at 252.855 kb on + strand, within GFF2574 at 252.855 kb on + strand, within GFF2574 at 252.856 kb on - strand, within GFF2574 at 252.963 kb on + strand, within GFF2574 at 252.976 kb on - strand, within GFF2574 at 252.976 kb on - strand, within GFF2574 at 253.230 kb on + strand, within GFF2574 at 253.231 kb on - strand, within GFF2574 at 253.258 kb on - strand, within GFF2574 at 253.308 kb on - strand, within GFF2574 at 254.088 kb on + strand, within GFF2574 at 254.088 kb on + strand, within GFF2574 at 254.088 kb on + strand, within GFF2574 at 254.089 kb on - strand, within GFF2574 at 254.254 kb on - strand, within GFF2574 at 254.561 kb on + strand, within GFF2574 at 254.664 kb on + strand, within GFF2574 at 254.664 kb on + strand, within GFF2574 at 254.664 kb on + strand, within GFF2574 at 254.664 kb on + strand, within GFF2574 at 254.664 kb on + strand, within GFF2574 at 254.664 kb on + strand, within GFF2574 at 254.665 kb on - strand, within GFF2574 at 254.665 kb on - strand, within GFF2574 at 254.665 kb on - strand, within GFF2574 at 254.665 kb on - strand, within GFF2574 at 254.665 kb on - strand, within GFF2574 at 254.896 kb on - strand at 254.937 kb on + strand at 254.937 kb on + strand at 254.937 kb on + strand at 254.937 kb on + strand at 254.938 kb on - strand at 254.938 kb on - strand at 254.938 kb on - strand at 254.938 kb on - strand at 255.083 kb on - strand at 255.083 kb on - strand at 255.088 kb on - strand at 255.088 kb on - strand at 255.088 kb on - strand at 255.106 kb on + strand at 255.106 kb on + strand at 255.106 kb on + strand at 255.106 kb on + strand at 255.106 kb on + strand at 255.106 kb on + strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.107 kb on - strand at 255.112 kb on + strand at 255.112 kb on + strand at 255.112 kb on + strand at 255.112 kb on + strand at 255.113 kb on - strand at 255.113 kb on - strand at 255.113 kb on - strand at 255.562 kb on + strand, within GFF2575 at 255.626 kb on + strand, within GFF2575 at 255.627 kb on - strand, within GFF2575 at 255.627 kb on - strand, within GFF2575 at 255.688 kb on + strand, within GFF2575 at 255.689 kb on - strand, within GFF2575 at 255.689 kb on - strand, within GFF2575 at 255.868 kb on + strand, within GFF2575 at 255.962 kb on - strand at 255.962 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 251,665 + GFF2573 0.81 -1.4 251,666 - GFF2573 0.81 -0.2 251,666 - GFF2573 0.81 -1.8 251,666 - GFF2573 0.81 -0.1 251,666 - GFF2573 0.81 -0.9 251,666 - GFF2573 0.81 -0.2 251,666 - GFF2573 0.81 -0.2 251,716 + GFF2573 0.83 -0.3 251,716 + GFF2573 0.83 +0.4 251,775 + GFF2573 0.84 +1.6 251,775 + GFF2573 0.84 -0.0 251,776 - GFF2573 0.84 -0.6 251,872 + GFF2573 0.87 +0.1 251,872 + GFF2573 0.87 +0.2 251,872 + GFF2573 0.87 -0.2 251,873 - GFF2573 0.87 -0.8 251,992 + -0.0 251,992 + -0.3 251,992 + +0.7 251,992 + -1.4 251,992 + +0.2 251,992 + -0.4 251,992 + -0.5 251,992 + -0.3 251,993 - +0.4 251,993 - -0.5 251,993 - +0.7 251,993 - -0.3 251,993 - -1.7 252,010 + -0.0 252,011 - -0.7 252,011 - -0.5 252,121 + -1.8 252,121 + -0.3 252,122 - -0.4 252,122 - -0.3 252,124 + +0.5 252,124 + -0.4 252,124 + -1.0 252,124 + -0.3 252,124 + -1.0 252,125 - +0.5 252,125 - -0.8 252,125 - -0.7 252,125 - -0.6 252,125 - -0.3 252,151 + +0.5 252,151 + -0.0 252,152 - -1.0 252,152 - -0.7 252,175 + +0.3 252,408 + -0.7 252,409 - -1.7 252,439 + -1.8 252,684 + +1.3 252,685 - -0.9 252,717 + -1.6 252,717 + -1.3 252,812 + GFF2574 0.13 +1.8 252,812 + GFF2574 0.13 -0.8 252,855 + GFF2574 0.15 +0.3 252,855 + GFF2574 0.15 -0.6 252,856 - GFF2574 0.15 -0.1 252,963 + GFF2574 0.19 +0.5 252,976 - GFF2574 0.20 -1.1 252,976 - GFF2574 0.20 +0.8 253,230 + GFF2574 0.30 -0.9 253,231 - GFF2574 0.30 +0.8 253,258 - GFF2574 0.31 -0.3 253,308 - GFF2574 0.33 +0.7 254,088 + GFF2574 0.64 +1.0 254,088 + GFF2574 0.64 +0.3 254,088 + GFF2574 0.64 -0.3 254,089 - GFF2574 0.64 -0.2 254,254 - GFF2574 0.71 -0.1 254,561 + GFF2574 0.83 -0.6 254,664 + GFF2574 0.87 +0.7 254,664 + GFF2574 0.87 -0.6 254,664 + GFF2574 0.87 -0.7 254,664 + GFF2574 0.87 +1.1 254,664 + GFF2574 0.87 -1.6 254,664 + GFF2574 0.87 -0.9 254,665 - GFF2574 0.87 +0.2 254,665 - GFF2574 0.87 -0.7 254,665 - GFF2574 0.87 -1.2 254,665 - GFF2574 0.87 -1.2 254,665 - GFF2574 0.87 +0.1 254,896 - -0.0 254,937 + +1.1 254,937 + -0.2 254,937 + -0.7 254,937 + -0.7 254,938 - +0.7 254,938 - -0.9 254,938 - +0.3 254,938 - -1.3 255,083 - -0.7 255,083 - +1.3 255,088 - -0.3 255,088 - -0.9 255,088 - -0.5 255,106 + -0.3 255,106 + -0.1 255,106 + -1.9 255,106 + -0.8 255,106 + -0.4 255,106 + -0.6 255,107 - -0.5 255,107 - -0.7 255,107 - -0.8 255,107 - -0.4 255,107 - +0.2 255,107 - +1.4 255,107 - -0.1 255,107 - -0.9 255,107 - -0.9 255,107 - -0.7 255,107 - -0.5 255,107 - -0.3 255,107 - -0.5 255,112 + -0.3 255,112 + +1.5 255,112 + +0.6 255,112 + +0.3 255,113 - -1.0 255,113 - +0.1 255,113 - +0.1 255,562 + GFF2575 0.55 -0.2 255,626 + GFF2575 0.62 -0.2 255,627 - GFF2575 0.62 -0.0 255,627 - GFF2575 0.62 -1.2 255,688 + GFF2575 0.69 +0.1 255,689 - GFF2575 0.69 -0.1 255,689 - GFF2575 0.69 +0.7 255,868 + GFF2575 0.89 +0.9 255,962 - -1.3 255,962 - -0.7
Or see this region's nucleotide sequence