Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2562 and GFF2563 are separated by 3 nucleotides GFF2563 and GFF2564 are separated by 10 nucleotides GFF2564 and GFF2565 are separated by 97 nucleotides GFF2565 and GFF2566 are separated by 212 nucleotides
GFF2562 - hypothetical protein, at 235,381 to 235,731
GFF2562
GFF2563 - hypothetical protein, at 235,735 to 236,058
GFF2563
GFF2564 - hypothetical protein, at 236,069 to 236,359
GFF2564
GFF2565 - hypothetical protein, at 236,457 to 236,663
GFF2565
GFF2566 - Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, at 236,876 to 237,829
GFF2566
Position (kb) 236
237 Strain fitness (log2 ratio) -1
0
1 at 235.630 kb on + strand, within GFF2562 at 235.630 kb on + strand, within GFF2562 at 235.630 kb on + strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 235.631 kb on - strand, within GFF2562 at 236.079 kb on + strand at 236.080 kb on - strand at 236.085 kb on + strand at 236.085 kb on + strand at 236.085 kb on + strand at 236.085 kb on + strand at 236.085 kb on + strand at 236.086 kb on - strand at 236.086 kb on - strand at 236.086 kb on - strand at 236.086 kb on - strand at 236.091 kb on + strand at 236.091 kb on + strand at 236.091 kb on + strand at 236.091 kb on + strand at 236.095 kb on - strand at 236.251 kb on - strand, within GFF2564 at 236.251 kb on - strand, within GFF2564 at 236.316 kb on + strand, within GFF2564 at 236.317 kb on - strand, within GFF2564 at 236.317 kb on - strand, within GFF2564 at 236.338 kb on + strand at 236.339 kb on - strand at 236.396 kb on + strand at 236.397 kb on - strand at 236.397 kb on - strand at 236.397 kb on - strand at 236.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 235,630 + GFF2562 0.71 -0.8 235,630 + GFF2562 0.71 +0.7 235,630 + GFF2562 0.71 -0.5 235,631 - GFF2562 0.71 +0.3 235,631 - GFF2562 0.71 -1.1 235,631 - GFF2562 0.71 -0.7 235,631 - GFF2562 0.71 -0.6 235,631 - GFF2562 0.71 -0.6 235,631 - GFF2562 0.71 +0.2 235,631 - GFF2562 0.71 -0.2 235,631 - GFF2562 0.71 -0.9 235,631 - GFF2562 0.71 -0.5 235,631 - GFF2562 0.71 -0.9 236,079 + +0.1 236,080 - -1.1 236,085 + -0.5 236,085 + -1.4 236,085 + -0.3 236,085 + -1.2 236,085 + -0.2 236,086 - +0.1 236,086 - -0.3 236,086 - +0.2 236,086 - -0.2 236,091 + -0.0 236,091 + -1.1 236,091 + -0.2 236,091 + +0.7 236,095 - -0.8 236,251 - GFF2564 0.63 +0.5 236,251 - GFF2564 0.63 +0.4 236,316 + GFF2564 0.85 -0.2 236,317 - GFF2564 0.85 -1.6 236,317 - GFF2564 0.85 +1.0 236,338 + -1.2 236,339 - -0.0 236,396 + -0.7 236,397 - -0.4 236,397 - -0.3 236,397 - +0.5 236,397 - -0.6
Or see this region's nucleotide sequence