Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2526 and GFF2527 are separated by 483 nucleotides GFF2527 and GFF2528 are separated by 191 nucleotides GFF2528 and GFF2529 are separated by 207 nucleotides
GFF2526 - hypothetical protein, at 194,700 to 195,281
GFF2526
GFF2527 - hypothetical protein, at 195,765 to 195,899
GFF2527
GFF2528 - hypothetical protein, at 196,091 to 197,131
GFF2528
GFF2529 - Transcriptional repressor IclR, at 197,339 to 198,193
GFF2529
Position (kb) 196
197
198 Strain fitness (log2 ratio) -2
-1
0
1 at 195.118 kb on + strand, within GFF2526 at 195.119 kb on - strand, within GFF2526 at 195.248 kb on - strand at 195.265 kb on + strand at 195.266 kb on - strand at 195.266 kb on - strand at 195.318 kb on + strand at 195.421 kb on - strand at 195.452 kb on + strand at 195.453 kb on - strand at 195.466 kb on - strand at 195.466 kb on - strand at 195.530 kb on + strand at 195.645 kb on - strand at 195.695 kb on + strand at 195.807 kb on + strand, within GFF2527 at 195.807 kb on + strand, within GFF2527 at 195.808 kb on - strand, within GFF2527 at 195.808 kb on - strand, within GFF2527 at 195.924 kb on + strand at 196.653 kb on + strand, within GFF2528 at 196.653 kb on + strand, within GFF2528 at 196.653 kb on + strand, within GFF2528 at 196.653 kb on + strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.654 kb on - strand, within GFF2528 at 196.698 kb on + strand, within GFF2528 at 196.698 kb on + strand, within GFF2528 at 196.803 kb on + strand, within GFF2528 at 196.804 kb on - strand, within GFF2528 at 196.809 kb on + strand, within GFF2528 at 196.923 kb on + strand, within GFF2528 at 196.923 kb on + strand, within GFF2528 at 196.923 kb on + strand, within GFF2528 at 196.923 kb on + strand, within GFF2528 at 196.924 kb on - strand, within GFF2528 at 196.924 kb on - strand, within GFF2528 at 196.924 kb on - strand, within GFF2528 at 197.116 kb on - strand at 197.222 kb on + strand at 197.222 kb on + strand at 197.222 kb on + strand at 197.223 kb on - strand at 197.226 kb on + strand at 197.303 kb on - strand at 197.303 kb on - strand at 197.303 kb on - strand at 197.584 kb on - strand, within GFF2529 at 197.624 kb on + strand, within GFF2529 at 197.625 kb on - strand, within GFF2529 at 197.882 kb on + strand, within GFF2529
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 195,118 + GFF2526 0.72 -0.5 195,119 - GFF2526 0.72 -2.7 195,248 - -1.1 195,265 + -0.7 195,266 - -0.6 195,266 - -0.1 195,318 + -0.1 195,421 - -0.5 195,452 + -1.1 195,453 - -0.3 195,466 - +0.9 195,466 - -1.1 195,530 + +0.3 195,645 - +0.1 195,695 + -0.3 195,807 + GFF2527 0.31 +1.7 195,807 + GFF2527 0.31 +0.1 195,808 - GFF2527 0.32 -0.9 195,808 - GFF2527 0.32 -0.4 195,924 + -0.4 196,653 + GFF2528 0.54 +1.2 196,653 + GFF2528 0.54 -0.8 196,653 + GFF2528 0.54 -0.2 196,653 + GFF2528 0.54 +0.3 196,654 - GFF2528 0.54 +0.1 196,654 - GFF2528 0.54 +0.2 196,654 - GFF2528 0.54 +0.3 196,654 - GFF2528 0.54 -0.4 196,654 - GFF2528 0.54 -0.3 196,698 + GFF2528 0.58 -1.3 196,698 + GFF2528 0.58 +0.8 196,803 + GFF2528 0.68 +1.6 196,804 - GFF2528 0.68 -0.4 196,809 + GFF2528 0.69 +0.7 196,923 + GFF2528 0.80 -0.4 196,923 + GFF2528 0.80 +0.1 196,923 + GFF2528 0.80 +0.1 196,923 + GFF2528 0.80 -0.6 196,924 - GFF2528 0.80 -0.1 196,924 - GFF2528 0.80 -0.5 196,924 - GFF2528 0.80 +0.9 197,116 - +0.6 197,222 + +0.4 197,222 + -0.1 197,222 + -0.3 197,223 - -1.3 197,226 + -1.6 197,303 - +0.3 197,303 - -0.8 197,303 - +0.5 197,584 - GFF2529 0.29 -1.1 197,624 + GFF2529 0.33 +0.5 197,625 - GFF2529 0.33 -0.5 197,882 + GFF2529 0.64 -0.2
Or see this region's nucleotide sequence