Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2522 and GFF2523 are separated by 139 nucleotides GFF2523 and GFF2524 are separated by 197 nucleotides
GFF2522 - 3-keto-5-aminohexanoate cleavage enzyme, at 185,769 to 186,719
GFF2522
GFF2523 - Glutamate synthase [NADPH] small chain, at 186,859 to 188,280
GFF2523
GFF2524 - Ferredoxin-dependent glutamate synthase 1, at 188,478 to 193,181
GFF2524
Position (kb) 186
187
188
189 Strain fitness (log2 ratio) -1
0
1
2 at 185.859 kb on + strand at 185.860 kb on - strand at 185.860 kb on - strand at 185.860 kb on - strand at 186.057 kb on + strand, within GFF2522 at 186.057 kb on + strand, within GFF2522 at 186.057 kb on + strand, within GFF2522 at 186.057 kb on + strand, within GFF2522 at 186.057 kb on + strand, within GFF2522 at 186.057 kb on + strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.058 kb on - strand, within GFF2522 at 186.162 kb on - strand, within GFF2522 at 186.162 kb on - strand, within GFF2522 at 186.165 kb on + strand, within GFF2522 at 186.165 kb on + strand, within GFF2522 at 186.165 kb on + strand, within GFF2522 at 186.244 kb on - strand, within GFF2522 at 186.254 kb on + strand, within GFF2522 at 186.255 kb on - strand, within GFF2522 at 186.275 kb on + strand, within GFF2522 at 186.304 kb on - strand, within GFF2522 at 186.304 kb on - strand, within GFF2522 at 186.308 kb on + strand, within GFF2522 at 186.321 kb on + strand, within GFF2522 at 186.321 kb on + strand, within GFF2522 at 186.322 kb on - strand, within GFF2522 at 186.469 kb on - strand, within GFF2522 at 188.358 kb on - strand at 188.358 kb on - strand at 188.358 kb on - strand at 188.358 kb on - strand at 188.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 185,859 + +0.3 185,860 - +0.0 185,860 - -0.8 185,860 - +0.7 186,057 + GFF2522 0.30 -1.1 186,057 + GFF2522 0.30 +0.7 186,057 + GFF2522 0.30 +0.1 186,057 + GFF2522 0.30 -0.3 186,057 + GFF2522 0.30 +0.4 186,057 + GFF2522 0.30 +0.1 186,058 - GFF2522 0.30 +0.7 186,058 - GFF2522 0.30 -0.2 186,058 - GFF2522 0.30 -0.9 186,058 - GFF2522 0.30 +0.1 186,058 - GFF2522 0.30 -1.6 186,058 - GFF2522 0.30 +0.1 186,058 - GFF2522 0.30 -0.1 186,058 - GFF2522 0.30 +1.8 186,162 - GFF2522 0.41 -0.3 186,162 - GFF2522 0.41 -0.9 186,165 + GFF2522 0.42 -0.2 186,165 + GFF2522 0.42 +0.5 186,165 + GFF2522 0.42 +0.4 186,244 - GFF2522 0.50 -1.0 186,254 + GFF2522 0.51 -0.0 186,255 - GFF2522 0.51 -0.7 186,275 + GFF2522 0.53 +0.3 186,304 - GFF2522 0.56 -0.8 186,304 - GFF2522 0.56 -0.1 186,308 + GFF2522 0.57 -0.3 186,321 + GFF2522 0.58 +0.4 186,321 + GFF2522 0.58 +1.7 186,322 - GFF2522 0.58 -1.0 186,469 - GFF2522 0.74 -0.2 188,358 - -0.1 188,358 - -0.3 188,358 - -0.1 188,358 - +0.7 188,413 - +0.7
Or see this region's nucleotide sequence