Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2497 and GFF2498 are separated by 136 nucleotides GFF2498 and GFF2499 are separated by 292 nucleotides GFF2499 and GFF2500 are separated by 147 nucleotides
GFF2497 - (3S)-malyl-CoA thioesterase, at 157,691 to 158,590
GFF2497
GFF2498 - hypothetical protein, at 158,727 to 159,938
GFF2498
GFF2499 - ATP synthase subunit b, at 160,231 to 160,722
GFF2499
GFF2500 - ATP synthase subunit b, at 160,870 to 161,589
GFF2500
Position (kb) 158
159
160 Strain fitness (log2 ratio) -2
-1
0
1
2 at 158.010 kb on + strand, within GFF2497 at 158.011 kb on - strand, within GFF2497 at 158.011 kb on - strand, within GFF2497 at 158.538 kb on + strand at 158.538 kb on + strand at 158.539 kb on - strand at 158.642 kb on + strand at 159.108 kb on - strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.109 kb on + strand, within GFF2498 at 159.110 kb on - strand, within GFF2498 at 159.110 kb on - strand, within GFF2498 at 159.206 kb on - strand, within GFF2498 at 159.206 kb on - strand, within GFF2498 at 159.310 kb on + strand, within GFF2498 at 159.310 kb on + strand, within GFF2498 at 159.527 kb on - strand, within GFF2498 at 159.527 kb on - strand, within GFF2498 at 159.638 kb on - strand, within GFF2498 at 159.638 kb on - strand, within GFF2498 at 159.638 kb on - strand, within GFF2498 at 159.822 kb on + strand at 159.823 kb on - strand at 159.999 kb on - strand at 159.999 kb on - strand at 159.999 kb on - strand at 159.999 kb on - strand at 159.999 kb on - strand at 160.001 kb on - strand at 160.004 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 158,010 + GFF2497 0.35 +0.3 158,011 - GFF2497 0.36 -0.5 158,011 - GFF2497 0.36 +0.0 158,538 + -0.3 158,538 + -0.3 158,539 - -0.6 158,642 + +1.0 159,108 - GFF2498 0.31 +2.1 159,109 + GFF2498 0.32 -0.8 159,109 + GFF2498 0.32 -0.5 159,109 + GFF2498 0.32 -0.8 159,109 + GFF2498 0.32 +0.2 159,109 + GFF2498 0.32 +0.3 159,109 + GFF2498 0.32 +2.0 159,109 + GFF2498 0.32 +0.0 159,110 - GFF2498 0.32 -1.8 159,110 - GFF2498 0.32 -0.3 159,206 - GFF2498 0.40 +0.5 159,206 - GFF2498 0.40 -0.3 159,310 + GFF2498 0.48 +0.2 159,310 + GFF2498 0.48 -0.3 159,527 - GFF2498 0.66 -0.3 159,527 - GFF2498 0.66 +1.3 159,638 - GFF2498 0.75 -0.4 159,638 - GFF2498 0.75 +1.3 159,638 - GFF2498 0.75 -1.1 159,822 + -0.1 159,823 - +1.6 159,999 - +0.4 159,999 - +0.4 159,999 - -1.0 159,999 - -0.4 159,999 - +0.7 160,001 - -0.4 160,004 - -0.1
Or see this region's nucleotide sequence