Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2439 and GFF2440 overlap by 1 nucleotides GFF2440 and GFF2441 are separated by 70 nucleotides GFF2441 and GFF2442 are separated by 275 nucleotides
GFF2439 - Sulfate transport system permease protein CysT, at 95,437 to 96,303
GFF2439
GFF2440 - Sulfate transport system permease protein CysW, at 96,303 to 97,175
GFF2440
GFF2441 - Ribulose-phosphate 3-epimerase, at 97,246 to 97,938
GFF2441
GFF2442 - Fructose-bisphosphate aldolase, at 98,214 to 99,278
GFF2442
Position (kb) 97
98 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 96.459 kb on + strand, within GFF2440 at 96.459 kb on + strand, within GFF2440 at 96.459 kb on + strand, within GFF2440 at 96.633 kb on + strand, within GFF2440 at 96.663 kb on + strand, within GFF2440 at 96.663 kb on + strand, within GFF2440 at 96.664 kb on - strand, within GFF2440 at 96.664 kb on - strand, within GFF2440 at 96.675 kb on + strand, within GFF2440 at 96.916 kb on - strand, within GFF2440 at 97.030 kb on - strand, within GFF2440 at 97.072 kb on + strand, within GFF2440 at 97.073 kb on - strand, within GFF2440 at 97.111 kb on - strand at 97.964 kb on - strand at 98.178 kb on + strand at 98.178 kb on + strand at 98.178 kb on + strand at 98.178 kb on + strand at 98.178 kb on + strand at 98.178 kb on + strand at 98.179 kb on - strand at 98.180 kb on + strand at 98.180 kb on + strand at 98.181 kb on - strand at 98.181 kb on - strand at 98.181 kb on - strand at 98.181 kb on - strand at 98.248 kb on + strand at 98.249 kb on - strand at 98.249 kb on - strand at 98.512 kb on + strand, within GFF2442 at 98.513 kb on - strand, within GFF2442 at 98.513 kb on - strand, within GFF2442 at 98.536 kb on + strand, within GFF2442 at 98.536 kb on + strand, within GFF2442 at 98.536 kb on + strand, within GFF2442 at 98.537 kb on - strand, within GFF2442 at 98.537 kb on - strand, within GFF2442 at 98.537 kb on - strand, within GFF2442 at 98.630 kb on + strand, within GFF2442 at 98.630 kb on + strand, within GFF2442 at 98.631 kb on - strand, within GFF2442 at 98.677 kb on + strand, within GFF2442 at 98.920 kb on + strand, within GFF2442 at 98.920 kb on + strand, within GFF2442 at 98.920 kb on + strand, within GFF2442 at 98.920 kb on + strand, within GFF2442 at 98.921 kb on - strand, within GFF2442 at 98.921 kb on - strand, within GFF2442 at 98.921 kb on - strand, within GFF2442 at 98.921 kb on - strand, within GFF2442 at 98.926 kb on + strand, within GFF2442 at 98.926 kb on + strand, within GFF2442 at 98.926 kb on + strand, within GFF2442
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 96,459 + GFF2440 0.18 +0.2 96,459 + GFF2440 0.18 +0.5 96,459 + GFF2440 0.18 +1.0 96,633 + GFF2440 0.38 +0.7 96,663 + GFF2440 0.41 -0.4 96,663 + GFF2440 0.41 +0.0 96,664 - GFF2440 0.41 -0.0 96,664 - GFF2440 0.41 -0.0 96,675 + GFF2440 0.43 +0.9 96,916 - GFF2440 0.70 +0.3 97,030 - GFF2440 0.83 -0.3 97,072 + GFF2440 0.88 +0.5 97,073 - GFF2440 0.88 +0.1 97,111 - -0.2 97,964 - -0.4 98,178 + -3.8 98,178 + -1.6 98,178 + -1.6 98,178 + -2.9 98,178 + -2.3 98,178 + -1.0 98,179 - +0.2 98,180 + +0.3 98,180 + -3.5 98,181 - +0.2 98,181 - +0.3 98,181 - +0.5 98,181 - -1.0 98,248 + -1.7 98,249 - -0.5 98,249 - -1.1 98,512 + GFF2442 0.28 -2.4 98,513 - GFF2442 0.28 -3.6 98,513 - GFF2442 0.28 -3.0 98,536 + GFF2442 0.30 -1.3 98,536 + GFF2442 0.30 -2.5 98,536 + GFF2442 0.30 -1.0 98,537 - GFF2442 0.30 -2.7 98,537 - GFF2442 0.30 -2.7 98,537 - GFF2442 0.30 -1.8 98,630 + GFF2442 0.39 -3.3 98,630 + GFF2442 0.39 -0.3 98,631 - GFF2442 0.39 -1.5 98,677 + GFF2442 0.43 -3.3 98,920 + GFF2442 0.66 -2.2 98,920 + GFF2442 0.66 -1.4 98,920 + GFF2442 0.66 -2.7 98,920 + GFF2442 0.66 -0.3 98,921 - GFF2442 0.66 -3.3 98,921 - GFF2442 0.66 -1.0 98,921 - GFF2442 0.66 +0.3 98,921 - GFF2442 0.66 -0.8 98,926 + GFF2442 0.67 -3.2 98,926 + GFF2442 0.67 -2.4 98,926 + GFF2442 0.67 -2.0
Or see this region's nucleotide sequence