Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2374 and GFF2375 are separated by 178 nucleotides GFF2375 and GFF2376 are separated by 132 nucleotides
GFF2374 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 26,421 to 27,290
GFF2374
GFF2375 - Beta-barrel assembly-enhancing protease, at 27,469 to 29,208
GFF2375
GFF2376 - Formate--tetrahydrofolate ligase, at 29,341 to 31,038
GFF2376
Position (kb) 27
28
29
30 Strain fitness (log2 ratio) -1
0
1
2
3 at 27.300 kb on + strand at 27.300 kb on + strand at 27.300 kb on + strand at 27.366 kb on - strand at 27.366 kb on - strand at 27.577 kb on - strand at 27.591 kb on + strand at 27.595 kb on + strand at 27.595 kb on + strand at 27.596 kb on - strand at 27.596 kb on - strand at 27.596 kb on - strand at 27.649 kb on + strand, within GFF2375 at 27.650 kb on - strand, within GFF2375 at 27.835 kb on + strand, within GFF2375 at 27.836 kb on - strand, within GFF2375 at 27.836 kb on - strand, within GFF2375 at 27.986 kb on - strand, within GFF2375 at 28.111 kb on + strand, within GFF2375 at 28.112 kb on - strand, within GFF2375 at 28.112 kb on - strand, within GFF2375 at 28.112 kb on - strand, within GFF2375 at 28.140 kb on + strand, within GFF2375 at 28.141 kb on - strand, within GFF2375 at 28.162 kb on + strand, within GFF2375 at 28.198 kb on - strand, within GFF2375 at 28.288 kb on + strand, within GFF2375 at 28.342 kb on + strand, within GFF2375 at 28.342 kb on + strand, within GFF2375 at 28.409 kb on - strand, within GFF2375 at 28.448 kb on - strand, within GFF2375 at 28.528 kb on + strand, within GFF2375 at 28.528 kb on + strand, within GFF2375 at 28.529 kb on - strand, within GFF2375 at 28.529 kb on - strand, within GFF2375 at 28.554 kb on + strand, within GFF2375 at 28.651 kb on + strand, within GFF2375 at 28.652 kb on - strand, within GFF2375 at 28.652 kb on - strand, within GFF2375 at 28.656 kb on + strand, within GFF2375 at 28.813 kb on + strand, within GFF2375 at 28.814 kb on - strand, within GFF2375 at 28.822 kb on + strand, within GFF2375 at 28.823 kb on - strand, within GFF2375 at 28.832 kb on + strand, within GFF2375 at 28.933 kb on + strand, within GFF2375 at 28.933 kb on + strand, within GFF2375 at 28.933 kb on + strand, within GFF2375 at 28.934 kb on - strand, within GFF2375 at 28.934 kb on - strand, within GFF2375 at 28.934 kb on - strand, within GFF2375 at 28.992 kb on + strand, within GFF2375 at 28.993 kb on - strand, within GFF2375 at 29.035 kb on + strand at 29.036 kb on - strand at 29.053 kb on - strand at 29.053 kb on - strand at 29.053 kb on - strand at 29.418 kb on - strand at 29.418 kb on - strand at 29.418 kb on - strand at 29.766 kb on + strand, within GFF2376 at 29.766 kb on + strand, within GFF2376 at 29.766 kb on + strand, within GFF2376 at 29.766 kb on + strand, within GFF2376 at 29.767 kb on - strand, within GFF2376 at 29.767 kb on - strand, within GFF2376 at 29.767 kb on - strand, within GFF2376 at 29.873 kb on - strand, within GFF2376 at 29.878 kb on - strand, within GFF2376 at 29.878 kb on - strand, within GFF2376 at 29.958 kb on - strand, within GFF2376 at 29.958 kb on - strand, within GFF2376
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 27,300 + +1.2 27,300 + -1.1 27,300 + -1.0 27,366 - +0.0 27,366 - +0.5 27,577 - +1.6 27,591 + +1.0 27,595 + +2.4 27,595 + +2.4 27,596 - +2.0 27,596 - +1.9 27,596 - +2.6 27,649 + GFF2375 0.10 +1.9 27,650 - GFF2375 0.10 +1.8 27,835 + GFF2375 0.21 +2.1 27,836 - GFF2375 0.21 +1.7 27,836 - GFF2375 0.21 +2.0 27,986 - GFF2375 0.30 +1.9 28,111 + GFF2375 0.37 +2.8 28,112 - GFF2375 0.37 +1.7 28,112 - GFF2375 0.37 +1.7 28,112 - GFF2375 0.37 +1.8 28,140 + GFF2375 0.39 +2.0 28,141 - GFF2375 0.39 +1.8 28,162 + GFF2375 0.40 +1.9 28,198 - GFF2375 0.42 +2.2 28,288 + GFF2375 0.47 +2.1 28,342 + GFF2375 0.50 +2.7 28,342 + GFF2375 0.50 +2.0 28,409 - GFF2375 0.54 +1.5 28,448 - GFF2375 0.56 +1.9 28,528 + GFF2375 0.61 +1.7 28,528 + GFF2375 0.61 +1.9 28,529 - GFF2375 0.61 +2.4 28,529 - GFF2375 0.61 +0.5 28,554 + GFF2375 0.62 +2.3 28,651 + GFF2375 0.68 +0.7 28,652 - GFF2375 0.68 +2.2 28,652 - GFF2375 0.68 +2.2 28,656 + GFF2375 0.68 +2.0 28,813 + GFF2375 0.77 +1.8 28,814 - GFF2375 0.77 +1.6 28,822 + GFF2375 0.78 +1.8 28,823 - GFF2375 0.78 +1.6 28,832 + GFF2375 0.78 +1.7 28,933 + GFF2375 0.84 +0.4 28,933 + GFF2375 0.84 +1.9 28,933 + GFF2375 0.84 +2.8 28,934 - GFF2375 0.84 +2.2 28,934 - GFF2375 0.84 +2.4 28,934 - GFF2375 0.84 +2.3 28,992 + GFF2375 0.88 +1.0 28,993 - GFF2375 0.88 +1.7 29,035 + +0.7 29,036 - +2.1 29,053 - +1.1 29,053 - +1.5 29,053 - +1.5 29,418 - -0.4 29,418 - +0.6 29,418 - -0.0 29,766 + GFF2376 0.25 -0.6 29,766 + GFF2376 0.25 -0.1 29,766 + GFF2376 0.25 +0.3 29,766 + GFF2376 0.25 -0.1 29,767 - GFF2376 0.25 +0.0 29,767 - GFF2376 0.25 +0.0 29,767 - GFF2376 0.25 +0.4 29,873 - GFF2376 0.31 -0.6 29,878 - GFF2376 0.32 +1.2 29,878 - GFF2376 0.32 -0.2 29,958 - GFF2376 0.36 -1.4 29,958 - GFF2376 0.36 +0.7
Or see this region's nucleotide sequence