Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2366 and GFF2367 overlap by 26 nucleotides GFF2367 and GFF2368 are separated by 46 nucleotides GFF2368 and GFF2369 are separated by 103 nucleotides
GFF2366 - hypothetical protein, at 18,470 to 18,697
GFF2366
GFF2367 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 18,672 to 19,445
GFF2367
GFF2368 - hypothetical protein, at 19,492 to 20,385
GFF2368
GFF2369 - Glutamine-dependent NAD(+) synthetase, at 20,489 to 22,153
GFF2369
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1
2 at 18.543 kb on + strand, within GFF2366 at 18.543 kb on + strand, within GFF2366 at 19.504 kb on + strand at 19.504 kb on + strand at 19.849 kb on + strand, within GFF2368 at 19.849 kb on + strand, within GFF2368 at 19.978 kb on + strand, within GFF2368 at 19.979 kb on - strand, within GFF2368 at 19.980 kb on + strand, within GFF2368 at 19.980 kb on + strand, within GFF2368 at 19.981 kb on - strand, within GFF2368 at 20.079 kb on - strand, within GFF2368 at 20.477 kb on + strand at 20.477 kb on + strand at 20.478 kb on - strand at 20.478 kb on - strand at 20.852 kb on + strand, within GFF2369 at 20.852 kb on + strand, within GFF2369 at 20.853 kb on - strand, within GFF2369 at 21.101 kb on + strand, within GFF2369 at 21.101 kb on + strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.102 kb on - strand, within GFF2369 at 21.300 kb on - strand, within GFF2369 at 21.329 kb on + strand, within GFF2369 at 21.329 kb on + strand, within GFF2369 at 21.330 kb on - strand, within GFF2369 at 21.330 kb on - strand, within GFF2369 at 21.330 kb on - strand, within GFF2369
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 18,543 + GFF2366 0.32 -0.8 18,543 + GFF2366 0.32 -0.3 19,504 + -0.2 19,504 + -0.3 19,849 + GFF2368 0.40 -0.3 19,849 + GFF2368 0.40 -0.7 19,978 + GFF2368 0.54 +0.5 19,979 - GFF2368 0.54 +0.4 19,980 + GFF2368 0.55 -0.0 19,980 + GFF2368 0.55 -1.1 19,981 - GFF2368 0.55 +0.9 20,079 - GFF2368 0.66 +0.3 20,477 + +0.5 20,477 + -2.3 20,478 - +0.1 20,478 - -0.8 20,852 + GFF2369 0.22 -0.2 20,852 + GFF2369 0.22 +1.3 20,853 - GFF2369 0.22 +0.7 21,101 + GFF2369 0.37 -1.6 21,101 + GFF2369 0.37 -0.3 21,102 - GFF2369 0.37 -0.9 21,102 - GFF2369 0.37 +1.9 21,102 - GFF2369 0.37 -0.5 21,102 - GFF2369 0.37 +0.5 21,102 - GFF2369 0.37 +1.1 21,300 - GFF2369 0.49 -0.2 21,329 + GFF2369 0.50 -0.1 21,329 + GFF2369 0.50 +0.3 21,330 - GFF2369 0.51 -0.3 21,330 - GFF2369 0.51 +1.3 21,330 - GFF2369 0.51 +0.0
Or see this region's nucleotide sequence