Strain Fitness in Xanthobacter sp. DMC5 around GFF2297

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2296 and GFF2297 are separated by 20 nucleotidesGFF2297 and GFF2298 overlap by 1 nucleotides GFF2296 - hypothetical protein, at 1,007,094 to 1,007,858 GFF2296 GFF2297 - Transcription termination/antitermination protein NusA, at 1,007,879 to 1,009,471 GFF2297 GFF2298 - Ribosome maturation factor RimP, at 1,009,471 to 1,010,334 GFF2298 Position (kb) 1007 1008 1009 1010Strain fitness (log2 ratio) -1 0 1at 1009.552 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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1,009,552 - -0.1

Or see this region's nucleotide sequence