Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2279 and GFF2280 are separated by 158 nucleotides GFF2280 and GFF2281 are separated by 7 nucleotides GFF2281 and GFF2282 are separated by 10 nucleotides
GFF2279 - hypothetical protein, at 987,347 to 988,549
GFF2279
GFF2280 - hypothetical protein, at 988,708 to 989,580
GFF2280
GFF2281 - hypothetical protein, at 989,588 to 990,064
GFF2281
GFF2282 - hypothetical protein, at 990,075 to 990,794
GFF2282
Position (kb) 988
989
990 Strain fitness (log2 ratio) -2
-1
0
1 at 987.933 kb on + strand, within GFF2279 at 988.314 kb on + strand, within GFF2279 at 988.315 kb on - strand, within GFF2279 at 988.315 kb on - strand, within GFF2279 at 988.350 kb on + strand, within GFF2279 at 988.351 kb on - strand, within GFF2279 at 988.351 kb on - strand, within GFF2279 at 988.724 kb on - strand at 988.724 kb on - strand at 988.946 kb on - strand, within GFF2280 at 988.946 kb on - strand, within GFF2280 at 989.009 kb on + strand, within GFF2280 at 989.056 kb on + strand, within GFF2280 at 989.057 kb on - strand, within GFF2280 at 989.057 kb on - strand, within GFF2280 at 989.057 kb on - strand, within GFF2280 at 989.110 kb on + strand, within GFF2280 at 989.111 kb on - strand, within GFF2280 at 989.389 kb on + strand, within GFF2280 at 989.389 kb on + strand, within GFF2280 at 989.413 kb on + strand, within GFF2280 at 989.414 kb on - strand, within GFF2280 at 989.414 kb on - strand, within GFF2280 at 989.414 kb on - strand, within GFF2280 at 989.425 kb on + strand, within GFF2280 at 989.425 kb on + strand, within GFF2280 at 989.425 kb on + strand, within GFF2280 at 989.426 kb on - strand, within GFF2280 at 990.032 kb on + strand at 990.032 kb on + strand at 990.062 kb on + strand at 990.063 kb on - strand at 990.437 kb on + strand, within GFF2282 at 990.437 kb on + strand, within GFF2282 at 990.446 kb on - strand, within GFF2282 at 990.446 kb on - strand, within GFF2282 at 990.572 kb on - strand, within GFF2282 at 990.575 kb on - strand, within GFF2282
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 987,933 + GFF2279 0.49 +1.0 988,314 + GFF2279 0.80 -1.8 988,315 - GFF2279 0.80 +0.4 988,315 - GFF2279 0.80 -1.0 988,350 + GFF2279 0.83 +0.4 988,351 - GFF2279 0.83 +0.1 988,351 - GFF2279 0.83 +0.5 988,724 - -0.7 988,724 - -0.2 988,946 - GFF2280 0.27 -0.2 988,946 - GFF2280 0.27 +0.1 989,009 + GFF2280 0.34 +0.8 989,056 + GFF2280 0.40 -1.1 989,057 - GFF2280 0.40 +0.8 989,057 - GFF2280 0.40 +0.3 989,057 - GFF2280 0.40 -0.6 989,110 + GFF2280 0.46 +0.3 989,111 - GFF2280 0.46 -0.3 989,389 + GFF2280 0.78 -0.3 989,389 + GFF2280 0.78 +0.8 989,413 + GFF2280 0.81 -0.0 989,414 - GFF2280 0.81 -0.5 989,414 - GFF2280 0.81 +0.3 989,414 - GFF2280 0.81 +0.5 989,425 + GFF2280 0.82 -0.3 989,425 + GFF2280 0.82 +0.8 989,425 + GFF2280 0.82 +0.9 989,426 - GFF2280 0.82 -0.1 990,032 + -0.3 990,032 + +1.3 990,062 + -1.0 990,063 - -1.1 990,437 + GFF2282 0.50 +0.3 990,437 + GFF2282 0.50 +0.0 990,446 - GFF2282 0.52 +0.7 990,446 - GFF2282 0.52 +0.3 990,572 - GFF2282 0.69 +0.3 990,575 - GFF2282 0.69 +1.0
Or see this region's nucleotide sequence