Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2266 and GFF2267 are separated by 237 nucleotides GFF2267 and GFF2268 are separated by 103 nucleotides
GFF2266 - 3-oxo-tetronate kinase, at 975,239 to 976,528
GFF2266
GFF2267 - Phosphoenolpyruvate carboxylase, at 976,766 to 979,546
GFF2267
GFF2268 - hypothetical protein, at 979,650 to 980,600
GFF2268
Position (kb) 976
977
978
979
980 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 976.147 kb on + strand, within GFF2266 at 976.148 kb on - strand, within GFF2266 at 976.148 kb on - strand, within GFF2266 at 976.148 kb on - strand, within GFF2266 at 976.149 kb on + strand, within GFF2266 at 976.149 kb on + strand, within GFF2266 at 976.149 kb on + strand, within GFF2266 at 976.150 kb on - strand, within GFF2266 at 976.150 kb on - strand, within GFF2266 at 976.150 kb on - strand, within GFF2266 at 976.150 kb on - strand, within GFF2266 at 976.150 kb on - strand, within GFF2266 at 976.241 kb on - strand, within GFF2266 at 976.492 kb on + strand at 976.493 kb on - strand at 976.495 kb on - strand at 976.585 kb on + strand at 976.586 kb on - strand at 976.598 kb on + strand at 976.900 kb on - strand at 976.998 kb on + strand at 977.172 kb on + strand, within GFF2267 at 977.173 kb on - strand, within GFF2267 at 977.291 kb on - strand, within GFF2267 at 977.373 kb on + strand, within GFF2267 at 977.373 kb on + strand, within GFF2267 at 977.373 kb on + strand, within GFF2267 at 977.374 kb on - strand, within GFF2267 at 977.374 kb on - strand, within GFF2267 at 977.398 kb on - strand, within GFF2267 at 977.460 kb on + strand, within GFF2267 at 977.556 kb on + strand, within GFF2267 at 977.559 kb on + strand, within GFF2267 at 977.559 kb on + strand, within GFF2267 at 977.643 kb on + strand, within GFF2267 at 977.644 kb on - strand, within GFF2267 at 977.644 kb on - strand, within GFF2267 at 977.690 kb on + strand, within GFF2267 at 977.691 kb on - strand, within GFF2267 at 977.748 kb on + strand, within GFF2267 at 977.749 kb on - strand, within GFF2267 at 977.749 kb on - strand, within GFF2267 at 977.850 kb on + strand, within GFF2267 at 978.217 kb on - strand, within GFF2267 at 978.368 kb on - strand, within GFF2267 at 978.435 kb on + strand, within GFF2267 at 978.513 kb on + strand, within GFF2267 at 978.514 kb on - strand, within GFF2267 at 978.587 kb on + strand, within GFF2267 at 978.661 kb on - strand, within GFF2267 at 978.858 kb on + strand, within GFF2267 at 978.858 kb on + strand, within GFF2267 at 978.858 kb on + strand, within GFF2267 at 978.859 kb on - strand, within GFF2267 at 978.864 kb on + strand, within GFF2267 at 978.867 kb on + strand, within GFF2267 at 979.170 kb on + strand, within GFF2267 at 979.171 kb on - strand, within GFF2267 at 979.291 kb on + strand at 979.597 kb on + strand at 979.597 kb on + strand at 979.604 kb on - strand at 979.902 kb on + strand, within GFF2268 at 979.902 kb on + strand, within GFF2268 at 980.191 kb on + strand, within GFF2268 at 980.323 kb on + strand, within GFF2268 at 980.395 kb on + strand, within GFF2268
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 976,147 + GFF2266 0.70 -1.2 976,148 - GFF2266 0.70 +0.9 976,148 - GFF2266 0.70 +1.0 976,148 - GFF2266 0.70 +0.6 976,149 + GFF2266 0.71 +0.3 976,149 + GFF2266 0.71 -1.0 976,149 + GFF2266 0.71 -3.7 976,150 - GFF2266 0.71 +0.4 976,150 - GFF2266 0.71 -0.9 976,150 - GFF2266 0.71 -0.3 976,150 - GFF2266 0.71 -0.0 976,150 - GFF2266 0.71 -1.1 976,241 - GFF2266 0.78 -0.1 976,492 + +1.4 976,493 - +0.1 976,495 - -0.5 976,585 + +0.2 976,586 - -0.5 976,598 + -0.2 976,900 - +0.0 976,998 + -1.2 977,172 + GFF2267 0.15 +0.4 977,173 - GFF2267 0.15 +0.2 977,291 - GFF2267 0.19 -1.1 977,373 + GFF2267 0.22 -1.1 977,373 + GFF2267 0.22 -1.1 977,373 + GFF2267 0.22 -1.7 977,374 - GFF2267 0.22 -1.9 977,374 - GFF2267 0.22 -2.3 977,398 - GFF2267 0.23 -2.0 977,460 + GFF2267 0.25 -0.6 977,556 + GFF2267 0.28 -1.6 977,559 + GFF2267 0.29 -1.4 977,559 + GFF2267 0.29 -2.7 977,643 + GFF2267 0.32 -0.7 977,644 - GFF2267 0.32 -1.5 977,644 - GFF2267 0.32 -3.3 977,690 + GFF2267 0.33 -1.4 977,691 - GFF2267 0.33 -0.7 977,748 + GFF2267 0.35 -3.2 977,749 - GFF2267 0.35 -2.1 977,749 - GFF2267 0.35 -1.2 977,850 + GFF2267 0.39 -1.1 978,217 - GFF2267 0.52 -0.2 978,368 - GFF2267 0.58 -2.0 978,435 + GFF2267 0.60 -1.3 978,513 + GFF2267 0.63 -1.1 978,514 - GFF2267 0.63 +0.8 978,587 + GFF2267 0.65 -2.1 978,661 - GFF2267 0.68 -3.3 978,858 + GFF2267 0.75 -2.6 978,858 + GFF2267 0.75 -0.4 978,858 + GFF2267 0.75 -0.1 978,859 - GFF2267 0.75 +0.7 978,864 + GFF2267 0.75 +0.8 978,867 + GFF2267 0.76 -0.4 979,170 + GFF2267 0.86 -2.5 979,171 - GFF2267 0.86 -0.1 979,291 + -0.4 979,597 + -0.8 979,597 + -1.0 979,604 - +0.3 979,902 + GFF2268 0.26 -0.2 979,902 + GFF2268 0.26 +0.6 980,191 + GFF2268 0.57 +0.2 980,323 + GFF2268 0.71 -1.2 980,395 + GFF2268 0.78 -1.0
Or see this region's nucleotide sequence