Strain Fitness in Xanthobacter sp. DMC5 around GFF2256

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2255 and GFF2256 are separated by 85 nucleotidesGFF2256 and GFF2257 overlap by 4 nucleotides GFF2255 - Cell division protein FtsZ, at 960,694 to 962,478 GFF2255 GFF2256 - Cell division protein FtsA, at 962,564 to 963,889 GFF2256 GFF2257 - Cell division protein FtsQ, at 963,886 to 964,914 GFF2257 GFF2258 - D-alanine--D-alanine ligase B, at 964,881 to 965,801 GFF2258 Position (kb) 962 963 964Strain fitness (log2 ratio) -1 0 1at 962.566 kb on - strandat 962.566 kb on - strandat 962.566 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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962,566 - +1.1
962,566 - -1.1
962,566 - +0.1

Or see this region's nucleotide sequence