Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF224 and GFF225 are separated by 7 nucleotides GFF225 and GFF226 are separated by 298 nucleotides
GFF224 - hypothetical protein, at 233,985 to 235,814
GFF224
GFF225 - hypothetical protein, at 235,822 to 237,033
GFF225
GFF226 - Agmatinase, at 237,332 to 238,312
GFF226
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -2
-1
0
1 at 235.098 kb on - strand, within GFF224 at 235.482 kb on + strand, within GFF224 at 235.599 kb on + strand, within GFF224 at 235.599 kb on + strand, within GFF224 at 235.600 kb on - strand, within GFF224 at 235.675 kb on + strand at 235.823 kb on + strand at 235.823 kb on + strand at 235.846 kb on + strand at 235.846 kb on + strand at 235.847 kb on - strand at 235.944 kb on - strand, within GFF225 at 236.009 kb on + strand, within GFF225 at 236.009 kb on + strand, within GFF225 at 236.009 kb on + strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.058 kb on + strand, within GFF225 at 236.162 kb on + strand, within GFF225 at 236.162 kb on + strand, within GFF225 at 236.163 kb on - strand, within GFF225 at 236.163 kb on - strand, within GFF225 at 236.417 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.799 kb on - strand, within GFF225 at 236.799 kb on - strand, within GFF225 at 237.088 kb on - strand at 237.104 kb on + strand at 237.141 kb on + strand at 237.243 kb on + strand at 237.244 kb on - strand at 237.244 kb on - strand at 237.244 kb on - strand at 237.246 kb on + strand at 237.269 kb on - strand at 237.269 kb on - strand at 237.331 kb on + strand at 237.331 kb on + strand at 237.331 kb on + strand at 237.584 kb on + strand, within GFF226 at 237.585 kb on - strand, within GFF226 at 237.585 kb on - strand, within GFF226 at 237.704 kb on + strand, within GFF226 at 237.704 kb on + strand, within GFF226 at 237.704 kb on + strand, within GFF226 at 237.755 kb on + strand, within GFF226 at 237.755 kb on + strand, within GFF226 at 237.756 kb on - strand, within GFF226 at 237.953 kb on + strand, within GFF226 at 237.953 kb on + strand, within GFF226 at 237.954 kb on - strand, within GFF226
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 235,098 - GFF224 0.61 -0.7 235,482 + GFF224 0.82 +0.5 235,599 + GFF224 0.88 +0.3 235,599 + GFF224 0.88 +0.2 235,600 - GFF224 0.88 -0.3 235,675 + +0.6 235,823 + -0.7 235,823 + -0.7 235,846 + +1.4 235,846 + +1.3 235,847 - -0.1 235,944 - GFF225 0.10 -1.1 236,009 + GFF225 0.15 -1.5 236,009 + GFF225 0.15 +0.0 236,009 + GFF225 0.15 -1.6 236,010 - GFF225 0.16 -2.0 236,010 - GFF225 0.16 -0.6 236,010 - GFF225 0.16 -0.5 236,010 - GFF225 0.16 +0.2 236,058 + GFF225 0.19 +0.1 236,162 + GFF225 0.28 -0.3 236,162 + GFF225 0.28 -0.6 236,163 - GFF225 0.28 -1.4 236,163 - GFF225 0.28 -0.4 236,417 + GFF225 0.49 -1.0 236,798 + GFF225 0.81 +0.1 236,798 + GFF225 0.81 +0.2 236,798 + GFF225 0.81 +0.3 236,798 + GFF225 0.81 +0.0 236,799 - GFF225 0.81 -0.4 236,799 - GFF225 0.81 -0.5 237,088 - -0.5 237,104 + -0.4 237,141 + -0.3 237,243 + +0.3 237,244 - -0.1 237,244 - -1.3 237,244 - +0.2 237,246 + +0.8 237,269 - -0.2 237,269 - +0.3 237,331 + -1.4 237,331 + -0.7 237,331 + +0.8 237,584 + GFF226 0.26 -0.3 237,585 - GFF226 0.26 -0.1 237,585 - GFF226 0.26 +0.7 237,704 + GFF226 0.38 +0.6 237,704 + GFF226 0.38 -0.3 237,704 + GFF226 0.38 +1.0 237,755 + GFF226 0.43 +0.8 237,755 + GFF226 0.43 +0.2 237,756 - GFF226 0.43 -1.9 237,953 + GFF226 0.63 -0.1 237,953 + GFF226 0.63 +1.2 237,954 - GFF226 0.63 -1.0
Or see this region's nucleotide sequence