Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2214 and GFF2215 are separated by 25 nucleotides GFF2215 and GFF2216 are separated by 137 nucleotides GFF2216 and GFF2217 overlap by 4 nucleotides
GFF2214 - Leucine-responsive regulatory protein, at 919,228 to 919,689
GFF2214
GFF2215 - hypothetical protein, at 919,715 to 920,524
GFF2215
GFF2216 - hypothetical protein, at 920,662 to 921,699
GFF2216
GFF2217 - Ribosome-associated ATPase, at 921,696 to 924,425
GFF2217
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1 at 919.664 kb on - strand at 919.722 kb on + strand at 919.722 kb on + strand at 919.853 kb on + strand, within GFF2215 at 919.853 kb on + strand, within GFF2215 at 919.937 kb on + strand, within GFF2215 at 919.937 kb on + strand, within GFF2215 at 919.937 kb on + strand, within GFF2215 at 920.267 kb on + strand, within GFF2215 at 920.268 kb on - strand, within GFF2215 at 920.268 kb on - strand, within GFF2215 at 920.268 kb on - strand, within GFF2215 at 920.310 kb on - strand, within GFF2215 at 920.310 kb on - strand, within GFF2215 at 920.312 kb on - strand, within GFF2215 at 920.418 kb on + strand, within GFF2215 at 920.418 kb on + strand, within GFF2215 at 920.419 kb on - strand, within GFF2215 at 920.450 kb on + strand at 920.450 kb on + strand at 920.731 kb on + strand at 920.732 kb on - strand at 921.322 kb on + strand, within GFF2216 at 921.322 kb on + strand, within GFF2216 at 921.323 kb on - strand, within GFF2216 at 921.583 kb on + strand, within GFF2216 at 921.584 kb on - strand, within GFF2216 at 921.679 kb on + strand at 921.682 kb on - strand at 921.759 kb on + strand at 921.759 kb on + strand at 921.997 kb on - strand, within GFF2217
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 919,664 - -0.6 919,722 + +0.1 919,722 + +0.1 919,853 + GFF2215 0.17 +1.7 919,853 + GFF2215 0.17 -0.8 919,937 + GFF2215 0.27 +0.7 919,937 + GFF2215 0.27 -2.4 919,937 + GFF2215 0.27 -0.3 920,267 + GFF2215 0.68 -0.4 920,268 - GFF2215 0.68 -0.9 920,268 - GFF2215 0.68 -0.0 920,268 - GFF2215 0.68 +0.7 920,310 - GFF2215 0.73 -0.2 920,310 - GFF2215 0.73 -0.3 920,312 - GFF2215 0.74 +0.3 920,418 + GFF2215 0.87 +0.5 920,418 + GFF2215 0.87 -0.1 920,419 - GFF2215 0.87 +0.0 920,450 + -0.6 920,450 + -0.7 920,731 + -0.6 920,732 - -0.6 921,322 + GFF2216 0.64 +0.1 921,322 + GFF2216 0.64 +1.3 921,323 - GFF2216 0.64 +0.3 921,583 + GFF2216 0.89 -1.0 921,584 - GFF2216 0.89 -1.4 921,679 + +1.2 921,682 - -0.1 921,759 + +0.2 921,759 + +0.4 921,997 - GFF2217 0.11 +0.5
Or see this region's nucleotide sequence