Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2202 and GFF2203 are separated by 192 nucleotides GFF2203 and GFF2204 are separated by 56 nucleotides
GFF2202 - hypothetical protein, at 903,779 to 905,614
GFF2202
GFF2203 - hypothetical protein, at 905,807 to 906,220
GFF2203
GFF2204 - hypothetical protein, at 906,277 to 907,821
GFF2204
Position (kb) 905
906
907 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 905.612 kb on + strand at 905.613 kb on - strand at 905.662 kb on + strand at 905.662 kb on + strand at 905.662 kb on + strand at 905.662 kb on + strand at 905.663 kb on - strand at 905.663 kb on - strand at 905.665 kb on + strand at 905.666 kb on - strand at 905.666 kb on - strand at 905.691 kb on - strand at 905.837 kb on + strand at 905.837 kb on + strand at 905.837 kb on + strand at 905.838 kb on - strand at 905.838 kb on - strand at 905.990 kb on + strand, within GFF2203 at 905.990 kb on + strand, within GFF2203 at 906.214 kb on + strand at 906.215 kb on - strand at 906.218 kb on + strand at 906.218 kb on + strand at 906.218 kb on + strand at 906.219 kb on - strand at 906.290 kb on + strand at 906.290 kb on + strand at 906.291 kb on - strand at 906.291 kb on - strand at 906.291 kb on - strand at 906.291 kb on - strand at 906.291 kb on - strand at 906.476 kb on + strand, within GFF2204 at 906.477 kb on - strand, within GFF2204 at 906.477 kb on - strand, within GFF2204 at 906.560 kb on + strand, within GFF2204 at 906.560 kb on + strand, within GFF2204 at 906.561 kb on - strand, within GFF2204 at 906.561 kb on - strand, within GFF2204 at 906.561 kb on - strand, within GFF2204 at 906.604 kb on + strand, within GFF2204 at 906.604 kb on + strand, within GFF2204 at 906.604 kb on + strand, within GFF2204 at 906.605 kb on - strand, within GFF2204 at 906.605 kb on - strand, within GFF2204 at 906.641 kb on + strand, within GFF2204 at 906.722 kb on + strand, within GFF2204 at 906.723 kb on - strand, within GFF2204 at 906.723 kb on - strand, within GFF2204 at 906.723 kb on - strand, within GFF2204 at 906.799 kb on + strand, within GFF2204 at 906.824 kb on + strand, within GFF2204 at 906.838 kb on + strand, within GFF2204 at 906.924 kb on + strand, within GFF2204 at 906.924 kb on + strand, within GFF2204 at 906.956 kb on + strand, within GFF2204 at 906.957 kb on - strand, within GFF2204 at 906.957 kb on - strand, within GFF2204 at 906.967 kb on - strand, within GFF2204
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 905,612 + +0.8 905,613 - -0.4 905,662 + -0.3 905,662 + +0.1 905,662 + -0.1 905,662 + +0.3 905,663 - -0.3 905,663 - -0.4 905,665 + +0.4 905,666 - -0.1 905,666 - -0.6 905,691 - +0.5 905,837 + -0.0 905,837 + -1.1 905,837 + -2.2 905,838 - -0.5 905,838 - +0.7 905,990 + GFF2203 0.44 +0.1 905,990 + GFF2203 0.44 -0.2 906,214 + +0.1 906,215 - -0.0 906,218 + +0.3 906,218 + +0.4 906,218 + -1.8 906,219 - -0.4 906,290 + +0.3 906,290 + -1.5 906,291 - +0.3 906,291 - -0.0 906,291 - -0.9 906,291 - -1.4 906,291 - +0.5 906,476 + GFF2204 0.13 -1.8 906,477 - GFF2204 0.13 -0.9 906,477 - GFF2204 0.13 -0.2 906,560 + GFF2204 0.18 +0.4 906,560 + GFF2204 0.18 +0.1 906,561 - GFF2204 0.18 +1.4 906,561 - GFF2204 0.18 -0.2 906,561 - GFF2204 0.18 -3.0 906,604 + GFF2204 0.21 -0.1 906,604 + GFF2204 0.21 +1.8 906,604 + GFF2204 0.21 -1.5 906,605 - GFF2204 0.21 -0.1 906,605 - GFF2204 0.21 +0.1 906,641 + GFF2204 0.24 -0.5 906,722 + GFF2204 0.29 +0.5 906,723 - GFF2204 0.29 -0.6 906,723 - GFF2204 0.29 -1.3 906,723 - GFF2204 0.29 +0.7 906,799 + GFF2204 0.34 -1.1 906,824 + GFF2204 0.35 +0.6 906,838 + GFF2204 0.36 +0.9 906,924 + GFF2204 0.42 +0.6 906,924 + GFF2204 0.42 -0.9 906,956 + GFF2204 0.44 +0.5 906,957 - GFF2204 0.44 -0.1 906,957 - GFF2204 0.44 +0.3 906,967 - GFF2204 0.45 +0.2
Or see this region's nucleotide sequence