Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2098 and GFF2099 are separated by 383 nucleotides GFF2099 and GFF2100 are separated by 35 nucleotides GFF2100 and GFF2101 are separated by 21 nucleotides
GFF2098 - Efflux pump membrane transporter BepE, at 781,003 to 784,275
GFF2098
GFF2099 - hypothetical protein, at 784,659 to 785,705
GFF2099
GFF2100 - hypothetical protein, at 785,741 to 785,857
GFF2100
GFF2101 - Multicopper oxidase MmcO, at 785,879 to 787,336
GFF2101
Position (kb) 784
785
786 Strain fitness (log2 ratio) -2
-1
0
1 at 783.823 kb on + strand, within GFF2098 at 783.824 kb on - strand, within GFF2098 at 783.824 kb on - strand, within GFF2098 at 783.824 kb on - strand, within GFF2098 at 783.994 kb on + strand at 784.113 kb on + strand at 784.114 kb on - strand at 784.228 kb on + strand at 784.229 kb on - strand at 784.709 kb on + strand at 784.709 kb on + strand at 784.709 kb on + strand at 784.710 kb on - strand at 784.710 kb on - strand at 784.764 kb on - strand, within GFF2099 at 784.890 kb on + strand, within GFF2099 at 784.890 kb on + strand, within GFF2099 at 784.978 kb on + strand, within GFF2099 at 784.979 kb on - strand, within GFF2099 at 785.044 kb on + strand, within GFF2099 at 785.241 kb on + strand, within GFF2099 at 785.241 kb on + strand, within GFF2099 at 785.242 kb on - strand, within GFF2099 at 785.245 kb on - strand, within GFF2099 at 785.245 kb on - strand, within GFF2099 at 785.591 kb on - strand, within GFF2099 at 785.754 kb on + strand, within GFF2100 at 785.755 kb on - strand, within GFF2100 at 785.851 kb on - strand at 785.851 kb on - strand at 785.922 kb on + strand at 785.922 kb on + strand at 785.922 kb on + strand at 785.923 kb on - strand at 785.923 kb on - strand at 785.923 kb on - strand at 785.924 kb on + strand at 786.006 kb on - strand at 786.577 kb on + strand, within GFF2101 at 786.577 kb on + strand, within GFF2101 at 786.660 kb on + strand, within GFF2101 at 786.669 kb on + strand, within GFF2101
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 783,823 + GFF2098 0.86 -0.8 783,824 - GFF2098 0.86 +0.0 783,824 - GFF2098 0.86 +0.5 783,824 - GFF2098 0.86 -2.4 783,994 + +0.4 784,113 + +0.8 784,114 - +0.2 784,228 + +0.0 784,229 - +0.1 784,709 + +0.6 784,709 + -0.4 784,709 + -1.2 784,710 - -0.9 784,710 - -0.4 784,764 - GFF2099 0.10 +0.3 784,890 + GFF2099 0.22 +0.0 784,890 + GFF2099 0.22 +1.4 784,978 + GFF2099 0.30 +0.6 784,979 - GFF2099 0.31 -1.3 785,044 + GFF2099 0.37 +0.3 785,241 + GFF2099 0.56 +0.6 785,241 + GFF2099 0.56 -0.3 785,242 - GFF2099 0.56 -0.3 785,245 - GFF2099 0.56 +0.6 785,245 - GFF2099 0.56 +0.8 785,591 - GFF2099 0.89 -0.5 785,754 + GFF2100 0.11 -0.8 785,755 - GFF2100 0.12 -0.6 785,851 - +0.1 785,851 - +0.5 785,922 + +0.2 785,922 + -0.2 785,922 + -0.2 785,923 - +0.8 785,923 - -0.5 785,923 - -1.1 785,924 + -0.5 786,006 - +0.5 786,577 + GFF2101 0.48 -1.7 786,577 + GFF2101 0.48 -1.0 786,660 + GFF2101 0.54 +1.7 786,669 + GFF2101 0.54 +0.2
Or see this region's nucleotide sequence