Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2082 and GFF2083 overlap by 4 nucleotides GFF2083 and GFF2084 are separated by 9 nucleotides
GFF2082 - Ferrichrome outer membrane transporter/phage receptor, at 763,311 to 765,497
GFF2082
GFF2083 - hypothetical protein, at 765,494 to 766,759
GFF2083
GFF2084 - Elongation factor 4, at 766,769 to 768,574
GFF2084
Position (kb) 765
766
767 Strain fitness (log2 ratio) -2
-1
0
1 at 764.533 kb on - strand, within GFF2082 at 764.553 kb on + strand, within GFF2082 at 764.554 kb on - strand, within GFF2082 at 764.673 kb on + strand, within GFF2082 at 764.674 kb on - strand, within GFF2082 at 764.821 kb on - strand, within GFF2082 at 764.847 kb on + strand, within GFF2082 at 764.847 kb on + strand, within GFF2082 at 764.848 kb on - strand, within GFF2082 at 764.856 kb on + strand, within GFF2082 at 764.857 kb on - strand, within GFF2082 at 764.932 kb on - strand, within GFF2082 at 764.932 kb on - strand, within GFF2082 at 764.932 kb on - strand, within GFF2082 at 764.949 kb on + strand, within GFF2082 at 764.950 kb on - strand, within GFF2082 at 765.129 kb on + strand, within GFF2082 at 765.129 kb on + strand, within GFF2082 at 765.129 kb on + strand, within GFF2082 at 765.130 kb on - strand, within GFF2082 at 765.130 kb on - strand, within GFF2082 at 765.130 kb on - strand, within GFF2082 at 765.231 kb on + strand, within GFF2082 at 765.231 kb on + strand, within GFF2082 at 765.232 kb on - strand, within GFF2082 at 765.286 kb on - strand at 765.339 kb on + strand at 765.361 kb on - strand at 765.364 kb on - strand at 765.447 kb on + strand at 765.447 kb on + strand at 765.486 kb on + strand at 765.853 kb on + strand, within GFF2083 at 765.853 kb on + strand, within GFF2083 at 765.854 kb on - strand, within GFF2083 at 765.947 kb on + strand, within GFF2083 at 765.983 kb on + strand, within GFF2083 at 765.983 kb on + strand, within GFF2083 at 765.983 kb on + strand, within GFF2083 at 765.983 kb on + strand, within GFF2083 at 765.984 kb on - strand, within GFF2083 at 765.984 kb on - strand, within GFF2083 at 765.984 kb on - strand, within GFF2083 at 765.984 kb on - strand, within GFF2083 at 765.984 kb on - strand, within GFF2083 at 765.984 kb on - strand, within GFF2083 at 766.173 kb on + strand, within GFF2083 at 766.174 kb on - strand, within GFF2083 at 766.391 kb on + strand, within GFF2083 at 766.392 kb on - strand, within GFF2083 at 766.404 kb on - strand, within GFF2083 at 766.404 kb on - strand, within GFF2083 at 767.166 kb on + strand, within GFF2084
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 764,533 - GFF2082 0.56 -0.9 764,553 + GFF2082 0.57 -0.3 764,554 - GFF2082 0.57 -0.2 764,673 + GFF2082 0.62 -0.9 764,674 - GFF2082 0.62 +0.1 764,821 - GFF2082 0.69 +1.4 764,847 + GFF2082 0.70 +0.6 764,847 + GFF2082 0.70 +0.1 764,848 - GFF2082 0.70 +0.4 764,856 + GFF2082 0.71 -0.7 764,857 - GFF2082 0.71 -0.9 764,932 - GFF2082 0.74 +0.3 764,932 - GFF2082 0.74 +0.3 764,932 - GFF2082 0.74 -0.5 764,949 + GFF2082 0.75 -1.8 764,950 - GFF2082 0.75 -0.2 765,129 + GFF2082 0.83 -0.5 765,129 + GFF2082 0.83 -0.9 765,129 + GFF2082 0.83 -0.2 765,130 - GFF2082 0.83 -0.4 765,130 - GFF2082 0.83 -0.1 765,130 - GFF2082 0.83 -0.9 765,231 + GFF2082 0.88 -0.6 765,231 + GFF2082 0.88 -0.7 765,232 - GFF2082 0.88 +0.4 765,286 - -0.0 765,339 + -1.1 765,361 - +0.1 765,364 - -0.4 765,447 + -0.0 765,447 + -1.1 765,486 + -0.6 765,853 + GFF2083 0.28 +0.8 765,853 + GFF2083 0.28 -0.6 765,854 - GFF2083 0.28 -0.6 765,947 + GFF2083 0.36 -2.1 765,983 + GFF2083 0.39 +0.2 765,983 + GFF2083 0.39 -0.3 765,983 + GFF2083 0.39 -0.4 765,983 + GFF2083 0.39 -1.1 765,984 - GFF2083 0.39 +0.6 765,984 - GFF2083 0.39 -1.6 765,984 - GFF2083 0.39 -0.3 765,984 - GFF2083 0.39 -1.1 765,984 - GFF2083 0.39 +0.8 765,984 - GFF2083 0.39 -0.6 766,173 + GFF2083 0.54 -0.9 766,174 - GFF2083 0.54 -0.2 766,391 + GFF2083 0.71 -0.1 766,392 - GFF2083 0.71 +0.6 766,404 - GFF2083 0.72 -0.6 766,404 - GFF2083 0.72 +0.4 767,166 + GFF2084 0.22 -0.4
Or see this region's nucleotide sequence