Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2079 and GFF2080 are separated by 304 nucleotides GFF2080 and GFF2081 are separated by 66 nucleotides GFF2081 and GFF2082 are separated by 256 nucleotides
GFF2079 - 10 kDa chaperonin 1, at 760,828 to 761,118
GFF2079
GFF2080 - hypothetical protein, at 761,423 to 761,962
GFF2080
GFF2081 - Glutaminase 1, at 762,029 to 763,054
GFF2081
GFF2082 - Ferrichrome outer membrane transporter/phage receptor, at 763,311 to 765,497
GFF2082
Position (kb) 762
763
764 Strain fitness (log2 ratio) -2
-1
0
1 at 761.127 kb on - strand at 761.205 kb on + strand at 761.206 kb on - strand at 761.254 kb on + strand at 761.254 kb on + strand at 761.255 kb on - strand at 761.255 kb on - strand at 761.255 kb on - strand at 761.357 kb on + strand at 761.357 kb on + strand at 761.357 kb on + strand at 762.165 kb on + strand, within GFF2081 at 762.165 kb on + strand, within GFF2081 at 762.270 kb on + strand, within GFF2081 at 762.358 kb on + strand, within GFF2081 at 762.426 kb on + strand, within GFF2081 at 762.426 kb on + strand, within GFF2081 at 762.427 kb on - strand, within GFF2081 at 762.912 kb on + strand, within GFF2081 at 762.912 kb on + strand, within GFF2081 at 762.954 kb on + strand at 762.954 kb on + strand at 762.955 kb on - strand at 762.955 kb on - strand at 762.955 kb on - strand at 763.165 kb on - strand at 763.267 kb on + strand at 763.322 kb on + strand at 763.322 kb on + strand at 763.323 kb on - strand at 763.570 kb on - strand, within GFF2082 at 763.618 kb on + strand, within GFF2082 at 763.618 kb on + strand, within GFF2082 at 763.618 kb on + strand, within GFF2082 at 763.618 kb on + strand, within GFF2082 at 763.619 kb on - strand, within GFF2082 at 763.619 kb on - strand, within GFF2082 at 763.619 kb on - strand, within GFF2082 at 763.619 kb on - strand, within GFF2082 at 763.701 kb on + strand, within GFF2082 at 763.702 kb on - strand, within GFF2082 at 763.702 kb on - strand, within GFF2082 at 763.728 kb on + strand, within GFF2082 at 763.758 kb on + strand, within GFF2082 at 763.758 kb on + strand, within GFF2082 at 763.758 kb on + strand, within GFF2082 at 763.758 kb on + strand, within GFF2082 at 763.758 kb on + strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.759 kb on - strand, within GFF2082 at 763.851 kb on + strand, within GFF2082 at 763.851 kb on + strand, within GFF2082 at 763.852 kb on - strand, within GFF2082 at 763.852 kb on - strand, within GFF2082 at 763.899 kb on + strand, within GFF2082 at 763.900 kb on - strand, within GFF2082
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 761,127 - +0.2 761,205 + -1.9 761,206 - +0.0 761,254 + +0.2 761,254 + -1.1 761,255 - -0.2 761,255 - -0.2 761,255 - +0.5 761,357 + -0.4 761,357 + +0.2 761,357 + -1.1 762,165 + GFF2081 0.13 -0.5 762,165 + GFF2081 0.13 -0.8 762,270 + GFF2081 0.23 -0.7 762,358 + GFF2081 0.32 -0.5 762,426 + GFF2081 0.39 -0.2 762,426 + GFF2081 0.39 -1.1 762,427 - GFF2081 0.39 -1.1 762,912 + GFF2081 0.86 +0.0 762,912 + GFF2081 0.86 +0.8 762,954 + -0.1 762,954 + -0.4 762,955 - -0.6 762,955 - +0.2 762,955 - -0.2 763,165 - +1.4 763,267 + +0.1 763,322 + +0.9 763,322 + +0.7 763,323 - +0.1 763,570 - GFF2082 0.12 +0.5 763,618 + GFF2082 0.14 +0.2 763,618 + GFF2082 0.14 +0.1 763,618 + GFF2082 0.14 +0.0 763,618 + GFF2082 0.14 -0.9 763,619 - GFF2082 0.14 -0.1 763,619 - GFF2082 0.14 -0.4 763,619 - GFF2082 0.14 +0.4 763,619 - GFF2082 0.14 +0.1 763,701 + GFF2082 0.18 -0.0 763,702 - GFF2082 0.18 +1.5 763,702 - GFF2082 0.18 -0.3 763,728 + GFF2082 0.19 -0.4 763,758 + GFF2082 0.20 +0.3 763,758 + GFF2082 0.20 -0.5 763,758 + GFF2082 0.20 -1.4 763,758 + GFF2082 0.20 -1.0 763,758 + GFF2082 0.20 -0.4 763,759 - GFF2082 0.20 +0.5 763,759 - GFF2082 0.20 -0.4 763,759 - GFF2082 0.20 +0.4 763,759 - GFF2082 0.20 -0.3 763,759 - GFF2082 0.20 +0.5 763,759 - GFF2082 0.20 +0.0 763,759 - GFF2082 0.20 -0.6 763,851 + GFF2082 0.25 +1.2 763,851 + GFF2082 0.25 -0.1 763,852 - GFF2082 0.25 +0.3 763,852 - GFF2082 0.25 +0.5 763,899 + GFF2082 0.27 +0.3 763,900 - GFF2082 0.27 -0.7
Or see this region's nucleotide sequence