Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2072 and GFF2073 are separated by 24 nucleotides GFF2073 and GFF2074 are separated by 226 nucleotides GFF2074 and GFF2075 are separated by 121 nucleotides GFF2075 and GFF2076 are separated by 110 nucleotides
GFF2072 - Adenine DNA glycosylase, at 753,004 to 754,161
GFF2072
GFF2073 - hypothetical protein, at 754,186 to 754,692
GFF2073
GFF2074 - hypothetical protein, at 754,919 to 755,578
GFF2074
GFF2075 - hypothetical protein, at 755,700 to 756,107
GFF2075
GFF2076 - hypothetical protein, at 756,218 to 757,093
GFF2076
Position (kb) 754
755
756 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 754.008 kb on - strand, within GFF2072 at 754.728 kb on + strand at 754.729 kb on - strand at 754.776 kb on + strand at 754.777 kb on - strand at 754.836 kb on - strand at 755.728 kb on + strand at 755.761 kb on + strand, within GFF2075 at 755.761 kb on + strand, within GFF2075 at 755.762 kb on - strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.973 kb on + strand, within GFF2075 at 756.013 kb on - strand, within GFF2075 at 756.153 kb on + strand at 756.153 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 754,008 - GFF2072 0.87 +0.4 754,728 + -0.4 754,729 - -1.0 754,776 + -0.2 754,777 - -0.4 754,836 - -1.3 755,728 + -0.1 755,761 + GFF2075 0.15 -1.8 755,761 + GFF2075 0.15 +0.4 755,762 - GFF2075 0.15 +0.2 755,794 + GFF2075 0.23 +0.3 755,794 + GFF2075 0.23 -0.6 755,794 + GFF2075 0.23 +0.4 755,794 + GFF2075 0.23 -0.4 755,794 + GFF2075 0.23 +0.4 755,795 - GFF2075 0.23 -2.2 755,795 - GFF2075 0.23 -0.1 755,795 - GFF2075 0.23 -0.1 755,795 - GFF2075 0.23 +1.5 755,973 + GFF2075 0.67 +3.0 756,013 - GFF2075 0.77 -1.4 756,153 + -0.0 756,153 + +1.1
Or see this region's nucleotide sequence