Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2063 and GFF2064 are separated by 261 nucleotides GFF2064 and GFF2065 are separated by 275 nucleotides
GFF2063 - hypothetical protein, at 741,713 to 742,615
GFF2063
GFF2064 - Aldehyde dehydrogenase, at 742,877 to 744,397
GFF2064
GFF2065 - Acetoin catabolism regulatory protein, at 744,673 to 746,610
GFF2065
Position (kb) 742
743
744
745 Strain fitness (log2 ratio) -2
-1
0
1
2 at 741.920 kb on + strand, within GFF2063 at 742.015 kb on + strand, within GFF2063 at 742.072 kb on + strand, within GFF2063 at 742.073 kb on - strand, within GFF2063 at 742.123 kb on + strand, within GFF2063 at 742.123 kb on + strand, within GFF2063 at 742.124 kb on - strand, within GFF2063 at 742.139 kb on - strand, within GFF2063 at 742.251 kb on + strand, within GFF2063 at 742.251 kb on + strand, within GFF2063 at 742.251 kb on + strand, within GFF2063 at 742.251 kb on + strand, within GFF2063 at 742.252 kb on - strand, within GFF2063 at 742.252 kb on - strand, within GFF2063 at 742.252 kb on - strand, within GFF2063 at 742.252 kb on - strand, within GFF2063 at 742.252 kb on - strand, within GFF2063 at 742.252 kb on - strand, within GFF2063 at 742.300 kb on + strand, within GFF2063 at 742.300 kb on + strand, within GFF2063 at 742.327 kb on + strand, within GFF2063 at 742.382 kb on + strand, within GFF2063 at 742.414 kb on - strand, within GFF2063 at 742.528 kb on + strand at 742.532 kb on - strand at 742.619 kb on - strand at 742.756 kb on + strand at 742.905 kb on + strand at 742.906 kb on - strand at 742.986 kb on + strand at 742.986 kb on + strand at 742.986 kb on + strand at 742.987 kb on - strand at 743.022 kb on + strand at 743.022 kb on + strand at 743.022 kb on + strand at 743.022 kb on + strand at 743.023 kb on - strand at 743.247 kb on + strand, within GFF2064 at 743.247 kb on + strand, within GFF2064 at 743.248 kb on - strand, within GFF2064 at 743.248 kb on - strand, within GFF2064 at 743.325 kb on - strand, within GFF2064 at 743.334 kb on + strand, within GFF2064 at 743.335 kb on - strand, within GFF2064 at 743.335 kb on - strand, within GFF2064 at 743.335 kb on - strand, within GFF2064 at 743.335 kb on - strand, within GFF2064 at 743.646 kb on + strand, within GFF2064 at 743.646 kb on + strand, within GFF2064 at 743.646 kb on + strand, within GFF2064 at 743.646 kb on + strand, within GFF2064 at 743.646 kb on + strand, within GFF2064 at 743.647 kb on - strand, within GFF2064 at 743.946 kb on + strand, within GFF2064 at 743.947 kb on - strand, within GFF2064 at 743.952 kb on + strand, within GFF2064 at 744.399 kb on - strand at 744.471 kb on + strand at 744.560 kb on - strand at 744.634 kb on + strand at 744.634 kb on + strand at 744.634 kb on + strand at 744.634 kb on + strand at 745.151 kb on - strand, within GFF2065 at 745.151 kb on - strand, within GFF2065
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 741,920 + GFF2063 0.23 +0.6 742,015 + GFF2063 0.33 -0.6 742,072 + GFF2063 0.40 -1.0 742,073 - GFF2063 0.40 +0.7 742,123 + GFF2063 0.45 -1.3 742,123 + GFF2063 0.45 -0.8 742,124 - GFF2063 0.46 +1.2 742,139 - GFF2063 0.47 -2.5 742,251 + GFF2063 0.60 -1.1 742,251 + GFF2063 0.60 -0.7 742,251 + GFF2063 0.60 -0.8 742,251 + GFF2063 0.60 +1.1 742,252 - GFF2063 0.60 +0.1 742,252 - GFF2063 0.60 -1.2 742,252 - GFF2063 0.60 -0.7 742,252 - GFF2063 0.60 +1.0 742,252 - GFF2063 0.60 +1.0 742,252 - GFF2063 0.60 +0.0 742,300 + GFF2063 0.65 +0.2 742,300 + GFF2063 0.65 -0.1 742,327 + GFF2063 0.68 +0.3 742,382 + GFF2063 0.74 -0.6 742,414 - GFF2063 0.78 +1.2 742,528 + -1.5 742,532 - -0.5 742,619 - +0.1 742,756 + +0.5 742,905 + +0.4 742,906 - -0.2 742,986 + -0.6 742,986 + +1.7 742,986 + +0.1 742,987 - -0.2 743,022 + +0.1 743,022 + -1.3 743,022 + -1.2 743,022 + +0.4 743,023 - -0.4 743,247 + GFF2064 0.24 -0.7 743,247 + GFF2064 0.24 +0.1 743,248 - GFF2064 0.24 -0.5 743,248 - GFF2064 0.24 -0.4 743,325 - GFF2064 0.29 -2.6 743,334 + GFF2064 0.30 -1.1 743,335 - GFF2064 0.30 +1.0 743,335 - GFF2064 0.30 -1.3 743,335 - GFF2064 0.30 -0.9 743,335 - GFF2064 0.30 +1.2 743,646 + GFF2064 0.51 -0.7 743,646 + GFF2064 0.51 -0.0 743,646 + GFF2064 0.51 -0.8 743,646 + GFF2064 0.51 -0.7 743,646 + GFF2064 0.51 -1.2 743,647 - GFF2064 0.51 -1.1 743,946 + GFF2064 0.70 -1.2 743,947 - GFF2064 0.70 +0.5 743,952 + GFF2064 0.71 +2.2 744,399 - +0.0 744,471 + -0.5 744,560 - -0.8 744,634 + -0.6 744,634 + +0.6 744,634 + -0.2 744,634 + -0.4 745,151 - GFF2065 0.25 -1.1 745,151 - GFF2065 0.25 -0.8
Or see this region's nucleotide sequence