Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2037 and GFF2038 are separated by 217 nucleotides GFF2038 and GFF2039 are separated by 658 nucleotides
GFF2037 - Putative 2-aminoethylphosphonate import ATP-binding protein PhnT, at 710,384 to 711,475
GFF2037
GFF2038 - hypothetical protein, at 711,693 to 712,664
GFF2038
GFF2039 - putative enoyl-CoA hydratase echA8, at 713,323 to 714,093
GFF2039
Position (kb) 711
712
713 Strain fitness (log2 ratio) -1
0
1 at 710.886 kb on + strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 711.201 kb on + strand, within GFF2037 at 711.201 kb on + strand, within GFF2037 at 711.201 kb on + strand, within GFF2037 at 711.202 kb on - strand, within GFF2037 at 711.202 kb on - strand, within GFF2037 at 711.202 kb on - strand, within GFF2037 at 711.415 kb on - strand at 711.470 kb on - strand at 711.470 kb on - strand at 711.691 kb on - strand at 711.909 kb on + strand, within GFF2038 at 711.986 kb on + strand, within GFF2038 at 711.987 kb on - strand, within GFF2038 at 712.179 kb on + strand, within GFF2038 at 712.179 kb on + strand, within GFF2038 at 712.180 kb on - strand, within GFF2038 at 712.180 kb on - strand, within GFF2038 at 712.180 kb on - strand, within GFF2038 at 712.180 kb on - strand, within GFF2038 at 712.221 kb on + strand, within GFF2038 at 712.223 kb on + strand, within GFF2038 at 712.223 kb on + strand, within GFF2038 at 712.224 kb on - strand, within GFF2038 at 712.359 kb on + strand, within GFF2038 at 712.359 kb on + strand, within GFF2038 at 712.360 kb on - strand, within GFF2038 at 712.662 kb on + strand at 712.662 kb on + strand at 712.662 kb on + strand at 712.663 kb on - strand at 713.076 kb on + strand at 713.450 kb on + strand, within GFF2039 at 713.450 kb on + strand, within GFF2039
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 710,886 + GFF2037 0.46 -0.3 710,887 - GFF2037 0.46 -0.5 710,887 - GFF2037 0.46 +0.5 710,887 - GFF2037 0.46 -0.0 710,887 - GFF2037 0.46 +0.7 711,201 + GFF2037 0.75 -1.1 711,201 + GFF2037 0.75 +0.8 711,201 + GFF2037 0.75 -0.2 711,202 - GFF2037 0.75 -0.2 711,202 - GFF2037 0.75 +0.8 711,202 - GFF2037 0.75 +0.2 711,415 - +0.1 711,470 - -0.2 711,470 - +1.0 711,691 - -0.6 711,909 + GFF2038 0.22 +0.8 711,986 + GFF2038 0.30 +0.1 711,987 - GFF2038 0.30 -0.5 712,179 + GFF2038 0.50 +0.4 712,179 + GFF2038 0.50 -0.2 712,180 - GFF2038 0.50 -0.1 712,180 - GFF2038 0.50 +0.1 712,180 - GFF2038 0.50 -0.6 712,180 - GFF2038 0.50 +1.1 712,221 + GFF2038 0.54 +0.7 712,223 + GFF2038 0.55 +0.4 712,223 + GFF2038 0.55 -0.3 712,224 - GFF2038 0.55 -0.1 712,359 + GFF2038 0.69 -0.2 712,359 + GFF2038 0.69 +0.3 712,360 - GFF2038 0.69 -0.2 712,662 + +0.1 712,662 + -0.1 712,662 + +0.6 712,663 - -0.1 713,076 + +0.1 713,450 + GFF2039 0.16 +0.2 713,450 + GFF2039 0.16 +0.2
Or see this region's nucleotide sequence