Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1947 and GFF1948 are separated by 375 nucleotides GFF1948 and GFF1949 are separated by 235 nucleotides
GFF1947 - Phosphoglucosamine mutase, at 602,081 to 603,424
GFF1947
GFF1948 - hypothetical protein, at 603,800 to 604,513
GFF1948
GFF1949 - Rhomboid protease GlpG, at 604,749 to 605,552
GFF1949
Position (kb) 603
604
605 Strain fitness (log2 ratio) -2
-1
0
1 at 603.721 kb on + strand at 603.721 kb on + strand at 603.721 kb on + strand at 603.721 kb on + strand at 603.749 kb on + strand at 603.990 kb on - strand, within GFF1948 at 604.010 kb on + strand, within GFF1948 at 604.010 kb on + strand, within GFF1948 at 604.010 kb on + strand, within GFF1948 at 604.011 kb on - strand, within GFF1948 at 604.011 kb on - strand, within GFF1948 at 604.011 kb on - strand, within GFF1948 at 604.011 kb on - strand, within GFF1948 at 604.011 kb on - strand, within GFF1948 at 604.041 kb on - strand, within GFF1948 at 604.106 kb on + strand, within GFF1948 at 604.148 kb on + strand, within GFF1948 at 604.149 kb on - strand, within GFF1948 at 604.149 kb on - strand, within GFF1948 at 604.266 kb on - strand, within GFF1948 at 604.419 kb on - strand, within GFF1948 at 604.419 kb on - strand, within GFF1948 at 604.825 kb on - strand at 604.959 kb on + strand, within GFF1949 at 604.959 kb on + strand, within GFF1949 at 605.007 kb on + strand, within GFF1949 at 605.200 kb on - strand, within GFF1949 at 605.200 kb on - strand, within GFF1949
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 603,721 + +0.6 603,721 + -0.8 603,721 + +1.1 603,721 + +0.7 603,749 + +0.3 603,990 - GFF1948 0.27 -0.3 604,010 + GFF1948 0.29 +1.2 604,010 + GFF1948 0.29 -0.1 604,010 + GFF1948 0.29 -2.2 604,011 - GFF1948 0.30 -0.6 604,011 - GFF1948 0.30 +0.4 604,011 - GFF1948 0.30 -2.1 604,011 - GFF1948 0.30 +0.1 604,011 - GFF1948 0.30 -0.7 604,041 - GFF1948 0.34 -0.6 604,106 + GFF1948 0.43 -0.5 604,148 + GFF1948 0.49 +1.7 604,149 - GFF1948 0.49 +0.3 604,149 - GFF1948 0.49 -0.8 604,266 - GFF1948 0.65 -1.2 604,419 - GFF1948 0.87 -0.8 604,419 - GFF1948 0.87 +0.2 604,825 - -1.2 604,959 + GFF1949 0.26 -0.6 604,959 + GFF1949 0.26 -2.1 605,007 + GFF1949 0.32 +0.9 605,200 - GFF1949 0.56 -0.4 605,200 - GFF1949 0.56 +1.2
Or see this region's nucleotide sequence