Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1865 and GFF1866 are separated by 30 nucleotides GFF1866 and GFF1867 are separated by 413 nucleotides GFF1867 and GFF1868 are separated by 167 nucleotides
GFF1865 - hypothetical protein, at 526,532 to 527,353
GFF1865
GFF1866 - hypothetical protein, at 527,384 to 527,773
GFF1866
GFF1867 - Replicative DNA helicase, at 528,187 to 529,668
GFF1867
GFF1868 - Alanine racemase, biosynthetic, at 529,836 to 530,837
GFF1868
Position (kb) 528
529
530 Strain fitness (log2 ratio) -1
0
1 at 527.218 kb on - strand, within GFF1865 at 527.218 kb on - strand, within GFF1865 at 527.218 kb on - strand, within GFF1865 at 527.301 kb on + strand at 527.302 kb on - strand at 527.422 kb on - strand at 527.511 kb on + strand, within GFF1866 at 527.511 kb on + strand, within GFF1866 at 527.511 kb on + strand, within GFF1866 at 527.511 kb on + strand, within GFF1866 at 527.512 kb on - strand, within GFF1866 at 527.616 kb on + strand, within GFF1866 at 527.616 kb on + strand, within GFF1866 at 527.616 kb on + strand, within GFF1866 at 527.616 kb on + strand, within GFF1866 at 527.616 kb on + strand, within GFF1866 at 527.616 kb on + strand, within GFF1866 at 527.617 kb on - strand, within GFF1866 at 527.617 kb on - strand, within GFF1866 at 527.617 kb on - strand, within GFF1866 at 527.859 kb on - strand at 527.882 kb on - strand at 527.910 kb on + strand at 528.067 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 527,218 - GFF1865 0.83 +1.1 527,218 - GFF1865 0.83 +0.2 527,218 - GFF1865 0.83 -0.0 527,301 + +0.1 527,302 - +0.3 527,422 - +1.1 527,511 + GFF1866 0.33 -0.0 527,511 + GFF1866 0.33 +0.6 527,511 + GFF1866 0.33 +0.0 527,511 + GFF1866 0.33 -0.5 527,512 - GFF1866 0.33 +0.2 527,616 + GFF1866 0.59 +0.6 527,616 + GFF1866 0.59 +0.8 527,616 + GFF1866 0.59 -0.1 527,616 + GFF1866 0.59 -0.4 527,616 + GFF1866 0.59 -1.5 527,616 + GFF1866 0.59 -1.5 527,617 - GFF1866 0.60 -0.7 527,617 - GFF1866 0.60 -0.3 527,617 - GFF1866 0.60 +0.2 527,859 - +0.3 527,882 - +0.5 527,910 + +0.1 528,067 - -0.2
Or see this region's nucleotide sequence