Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1838 and GFF1839 are separated by 169 nucleotides GFF1839 and GFF1840 are separated by 271 nucleotides GFF1840 and GFF1841 are separated by 251 nucleotides
GFF1838 - putative peptidoglycan glycosyltransferase FtsW, at 497,879 to 499,090
GFF1838
GFF1839 - ATP-dependent RNA helicase SrmB, at 499,260 to 501,863
GFF1839
GFF1840 - hypothetical protein, at 502,135 to 502,254
GFF1840
GFF1841 - hypothetical protein, at 502,506 to 502,937
GFF1841
Position (kb) 499
500
501
502 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 499.204 kb on - strand at 499.581 kb on + strand, within GFF1839 at 499.581 kb on + strand, within GFF1839 at 499.581 kb on + strand, within GFF1839 at 499.581 kb on + strand, within GFF1839 at 499.581 kb on + strand, within GFF1839 at 499.581 kb on + strand, within GFF1839 at 499.582 kb on - strand, within GFF1839 at 499.583 kb on + strand, within GFF1839 at 499.583 kb on + strand, within GFF1839 at 499.583 kb on + strand, within GFF1839 at 499.584 kb on - strand, within GFF1839 at 500.044 kb on - strand, within GFF1839 at 500.112 kb on + strand, within GFF1839 at 500.112 kb on + strand, within GFF1839 at 500.113 kb on - strand, within GFF1839 at 500.214 kb on + strand, within GFF1839 at 500.214 kb on + strand, within GFF1839 at 500.614 kb on - strand, within GFF1839 at 500.715 kb on + strand, within GFF1839 at 500.724 kb on + strand, within GFF1839 at 500.790 kb on + strand, within GFF1839 at 500.925 kb on + strand, within GFF1839 at 500.925 kb on + strand, within GFF1839 at 500.926 kb on - strand, within GFF1839 at 500.926 kb on - strand, within GFF1839 at 500.926 kb on - strand, within GFF1839 at 500.986 kb on - strand, within GFF1839 at 501.012 kb on + strand, within GFF1839 at 501.012 kb on + strand, within GFF1839 at 501.012 kb on + strand, within GFF1839 at 501.012 kb on + strand, within GFF1839 at 501.012 kb on + strand, within GFF1839 at 501.054 kb on + strand, within GFF1839 at 501.243 kb on + strand, within GFF1839 at 501.255 kb on + strand, within GFF1839 at 501.255 kb on + strand, within GFF1839 at 501.256 kb on - strand, within GFF1839 at 501.357 kb on + strand, within GFF1839 at 501.358 kb on - strand, within GFF1839 at 501.372 kb on + strand, within GFF1839 at 501.593 kb on + strand, within GFF1839 at 501.594 kb on - strand, within GFF1839 at 501.594 kb on - strand, within GFF1839 at 501.594 kb on - strand, within GFF1839 at 501.594 kb on - strand, within GFF1839 at 501.597 kb on + strand, within GFF1839 at 501.598 kb on - strand, within GFF1839 at 502.475 kb on + strand at 502.486 kb on + strand at 502.522 kb on + strand at 502.794 kb on + strand, within GFF1841 at 502.795 kb on - strand, within GFF1841 at 502.815 kb on + strand, within GFF1841 at 502.816 kb on - strand, within GFF1841
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 499,204 - -0.5 499,581 + GFF1839 0.12 -2.8 499,581 + GFF1839 0.12 +0.8 499,581 + GFF1839 0.12 +1.0 499,581 + GFF1839 0.12 -0.2 499,581 + GFF1839 0.12 -0.3 499,581 + GFF1839 0.12 +0.8 499,582 - GFF1839 0.12 +1.0 499,583 + GFF1839 0.12 +0.3 499,583 + GFF1839 0.12 +1.5 499,583 + GFF1839 0.12 -0.8 499,584 - GFF1839 0.12 -0.2 500,044 - GFF1839 0.30 -1.9 500,112 + GFF1839 0.33 +0.3 500,112 + GFF1839 0.33 -1.8 500,113 - GFF1839 0.33 +0.9 500,214 + GFF1839 0.37 -0.9 500,214 + GFF1839 0.37 +0.0 500,614 - GFF1839 0.52 -0.5 500,715 + GFF1839 0.56 +0.3 500,724 + GFF1839 0.56 -0.4 500,790 + GFF1839 0.59 +0.7 500,925 + GFF1839 0.64 +0.6 500,925 + GFF1839 0.64 +0.4 500,926 - GFF1839 0.64 +1.7 500,926 - GFF1839 0.64 +1.4 500,926 - GFF1839 0.64 -0.3 500,986 - GFF1839 0.66 +0.7 501,012 + GFF1839 0.67 -0.5 501,012 + GFF1839 0.67 -0.0 501,012 + GFF1839 0.67 -0.3 501,012 + GFF1839 0.67 -0.4 501,012 + GFF1839 0.67 +0.5 501,054 + GFF1839 0.69 -0.9 501,243 + GFF1839 0.76 -0.1 501,255 + GFF1839 0.77 -0.7 501,255 + GFF1839 0.77 +0.2 501,256 - GFF1839 0.77 -1.0 501,357 + GFF1839 0.81 +0.4 501,358 - GFF1839 0.81 -1.1 501,372 + GFF1839 0.81 +1.4 501,593 + GFF1839 0.90 +0.6 501,594 - GFF1839 0.90 -1.6 501,594 - GFF1839 0.90 +0.1 501,594 - GFF1839 0.90 -1.2 501,594 - GFF1839 0.90 +0.5 501,597 + GFF1839 0.90 -0.2 501,598 - GFF1839 0.90 +1.0 502,475 + -0.3 502,486 + -0.3 502,522 + -0.8 502,794 + GFF1841 0.67 -0.4 502,795 - GFF1841 0.67 +0.4 502,815 + GFF1841 0.72 -0.4 502,816 - GFF1841 0.72 -1.3
Or see this region's nucleotide sequence