Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1831 and GFF1832 are separated by 248 nucleotides GFF1832 and GFF1833 are separated by 102 nucleotides GFF1833 and GFF1834 are separated by 250 nucleotides
GFF1831 - Ethylmalonyl-CoA mutase, at 489,264 to 491,237
GFF1831
GFF1832 - hypothetical protein, at 491,486 to 491,866
GFF1832
GFF1833 - hypothetical protein, at 491,969 to 492,205
GFF1833
GFF1834 - Crotonyl-CoA carboxylase/reductase, at 492,456 to 493,739
GFF1834
Position (kb) 491
492
493 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 491.200 kb on + strand at 491.200 kb on + strand at 491.200 kb on + strand at 491.200 kb on + strand at 491.200 kb on + strand at 491.200 kb on + strand at 491.201 kb on - strand at 491.201 kb on - strand at 491.201 kb on - strand at 491.323 kb on - strand at 491.450 kb on - strand at 491.469 kb on - strand at 491.564 kb on + strand, within GFF1832 at 491.565 kb on - strand, within GFF1832 at 491.591 kb on + strand, within GFF1832 at 491.592 kb on - strand, within GFF1832 at 491.592 kb on - strand, within GFF1832 at 491.880 kb on - strand at 492.412 kb on + strand at 492.412 kb on + strand at 492.507 kb on + strand at 492.507 kb on + strand at 492.508 kb on - strand at 492.508 kb on - strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.556 kb on - strand at 492.556 kb on - strand at 493.015 kb on - strand, within GFF1834 at 493.015 kb on - strand, within GFF1834 at 493.015 kb on - strand, within GFF1834 at 493.015 kb on - strand, within GFF1834 at 493.086 kb on + strand, within GFF1834 at 493.087 kb on - strand, within GFF1834 at 493.087 kb on - strand, within GFF1834 at 493.197 kb on + strand, within GFF1834 at 493.198 kb on - strand, within GFF1834
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 491,200 + -1.9 491,200 + -3.6 491,200 + -2.3 491,200 + -1.5 491,200 + -3.2 491,200 + -3.0 491,201 - -2.3 491,201 - -2.5 491,201 - -0.9 491,323 - +1.1 491,450 - -1.7 491,469 - -0.3 491,564 + GFF1832 0.20 +1.2 491,565 - GFF1832 0.21 -1.3 491,591 + GFF1832 0.28 +0.9 491,592 - GFF1832 0.28 +1.4 491,592 - GFF1832 0.28 -0.2 491,880 - +0.9 492,412 + -0.3 492,412 + +0.2 492,507 + -1.7 492,507 + -3.0 492,508 - -2.7 492,508 - -1.7 492,555 + -2.3 492,555 + -2.8 492,555 + -2.7 492,555 + -0.9 492,555 + -1.3 492,556 - -2.4 492,556 - +0.4 493,015 - GFF1834 0.44 -2.0 493,015 - GFF1834 0.44 -2.8 493,015 - GFF1834 0.44 -1.4 493,015 - GFF1834 0.44 -2.9 493,086 + GFF1834 0.49 +0.4 493,087 - GFF1834 0.49 -2.5 493,087 - GFF1834 0.49 -2.0 493,197 + GFF1834 0.58 -2.5 493,198 - GFF1834 0.58 -2.1
Or see this region's nucleotide sequence