Strain Fitness in Xanthobacter sp. DMC5 around GFF1808

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF1807 and GFF1808 overlap by 4 nucleotidesGFF1808 and GFF1809 are separated by 569 nucleotides GFF1807 - Ornithine carbamoyltransferase, anabolic, at 460,826 to 461,758 GFF1807 GFF1808 - Succinylornithine transaminase/acetylornithine aminotransferase, at 461,755 to 462,963 GFF1808 GFF1809 - hypothetical protein, at 463,533 to 464,096 GFF1809 Position (kb) 461 462 463Strain fitness (log2 ratio) -1 0 1at 460.772 kb on - strandat 460.772 kb on - strandat 460.772 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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460,772 - +0.4
460,772 - +0.9
460,772 - +0.2

Or see this region's nucleotide sequence