Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1755 and GFF1756 are separated by 123 nucleotides GFF1756 and GFF1757 are separated by 99 nucleotides
GFF1755 - Hydrogen peroxide-inducible genes activator, at 404,044 to 404,973
GFF1755
GFF1756 - Catalase, at 405,097 to 406,602
GFF1756
GFF1757 - Aquaporin Z, at 406,702 to 407,391
GFF1757
Position (kb) 405
406
407 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 404.660 kb on + strand, within GFF1755 at 405.196 kb on + strand at 405.196 kb on + strand at 405.196 kb on + strand at 405.196 kb on + strand at 405.196 kb on + strand at 405.197 kb on - strand at 405.197 kb on - strand at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.505 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.910 kb on + strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.953 kb on - strand, within GFF1756 at 406.003 kb on + strand, within GFF1756 at 406.139 kb on - strand, within GFF1756 at 406.184 kb on - strand, within GFF1756 at 406.184 kb on - strand, within GFF1756 at 406.231 kb on - strand, within GFF1756 at 406.231 kb on - strand, within GFF1756 at 406.244 kb on - strand, within GFF1756 at 406.286 kb on - strand, within GFF1756 at 406.327 kb on + strand, within GFF1756 at 406.328 kb on - strand, within GFF1756 at 406.328 kb on - strand, within GFF1756 at 406.328 kb on - strand, within GFF1756 at 406.328 kb on - strand, within GFF1756 at 406.435 kb on + strand, within GFF1756 at 406.435 kb on + strand, within GFF1756 at 406.435 kb on + strand, within GFF1756 at 406.436 kb on - strand, within GFF1756 at 406.499 kb on - strand at 406.499 kb on - strand at 406.957 kb on + strand, within GFF1757 at 406.958 kb on - strand, within GFF1757 at 407.020 kb on - strand, within GFF1757 at 407.020 kb on - strand, within GFF1757 at 407.021 kb on + strand, within GFF1757 at 407.021 kb on + strand, within GFF1757 at 407.022 kb on - strand, within GFF1757 at 407.022 kb on - strand, within GFF1757 at 407.022 kb on - strand, within GFF1757 at 407.022 kb on - strand, within GFF1757 at 407.244 kb on - strand, within GFF1757 at 407.381 kb on + strand at 407.382 kb on - strand at 407.385 kb on + strand at 407.385 kb on + strand at 407.386 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 404,660 + GFF1755 0.66 +0.3 405,196 + -0.1 405,196 + -0.2 405,196 + +0.4 405,196 + -1.0 405,196 + -0.0 405,197 - +0.9 405,197 - +1.5 405,478 - GFF1756 0.25 -0.5 405,478 - GFF1756 0.25 -0.5 405,478 - GFF1756 0.25 +0.2 405,478 - GFF1756 0.25 -0.6 405,478 - GFF1756 0.25 -0.8 405,478 - GFF1756 0.25 -0.5 405,478 - GFF1756 0.25 +1.0 405,505 + GFF1756 0.27 -1.6 405,688 + GFF1756 0.39 -1.7 405,688 + GFF1756 0.39 +2.9 405,688 + GFF1756 0.39 +0.3 405,688 + GFF1756 0.39 -0.2 405,688 + GFF1756 0.39 -0.2 405,689 - GFF1756 0.39 +0.3 405,689 - GFF1756 0.39 -0.4 405,689 - GFF1756 0.39 -2.2 405,689 - GFF1756 0.39 -0.2 405,910 + GFF1756 0.54 -0.5 405,911 - GFF1756 0.54 -0.4 405,911 - GFF1756 0.54 +0.6 405,911 - GFF1756 0.54 -0.2 405,911 - GFF1756 0.54 -1.1 405,953 - GFF1756 0.57 -0.1 406,003 + GFF1756 0.60 +0.3 406,139 - GFF1756 0.69 +1.1 406,184 - GFF1756 0.72 -0.4 406,184 - GFF1756 0.72 -1.0 406,231 - GFF1756 0.75 +1.7 406,231 - GFF1756 0.75 +0.3 406,244 - GFF1756 0.76 +0.3 406,286 - GFF1756 0.79 +0.5 406,327 + GFF1756 0.82 +1.1 406,328 - GFF1756 0.82 -0.0 406,328 - GFF1756 0.82 -0.1 406,328 - GFF1756 0.82 +0.3 406,328 - GFF1756 0.82 -0.1 406,435 + GFF1756 0.89 -0.4 406,435 + GFF1756 0.89 -0.7 406,435 + GFF1756 0.89 -0.2 406,436 - GFF1756 0.89 -1.0 406,499 - +1.2 406,499 - +0.9 406,957 + GFF1757 0.37 +1.1 406,958 - GFF1757 0.37 -1.0 407,020 - GFF1757 0.46 +0.2 407,020 - GFF1757 0.46 -0.6 407,021 + GFF1757 0.46 +0.5 407,021 + GFF1757 0.46 +1.3 407,022 - GFF1757 0.46 +0.0 407,022 - GFF1757 0.46 -1.0 407,022 - GFF1757 0.46 +0.3 407,022 - GFF1757 0.46 -0.1 407,244 - GFF1757 0.79 -0.3 407,381 + -0.1 407,382 - -0.1 407,385 + +0.5 407,385 + -1.0 407,386 - -0.8
Or see this region's nucleotide sequence