Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1754 and GFF1755 are separated by 41 nucleotides GFF1755 and GFF1756 are separated by 123 nucleotides
GFF1754 - Phosphoribosylformylglycinamidine cyclo-ligase, at 402,929 to 404,002
GFF1754
GFF1755 - Hydrogen peroxide-inducible genes activator, at 404,044 to 404,973
GFF1755
GFF1756 - Catalase, at 405,097 to 406,602
GFF1756
Position (kb) 404
405 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 404.003 kb on - strand at 404.660 kb on + strand, within GFF1755 at 405.196 kb on + strand at 405.196 kb on + strand at 405.196 kb on + strand at 405.196 kb on + strand at 405.196 kb on + strand at 405.197 kb on - strand at 405.197 kb on - strand at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.478 kb on - strand, within GFF1756 at 405.505 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.688 kb on + strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.689 kb on - strand, within GFF1756 at 405.910 kb on + strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.911 kb on - strand, within GFF1756 at 405.953 kb on - strand, within GFF1756
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 404,003 - -0.2 404,660 + GFF1755 0.66 +0.3 405,196 + -0.1 405,196 + -0.2 405,196 + +0.4 405,196 + -1.0 405,196 + -0.0 405,197 - +0.9 405,197 - +1.5 405,478 - GFF1756 0.25 -0.5 405,478 - GFF1756 0.25 -0.5 405,478 - GFF1756 0.25 +0.2 405,478 - GFF1756 0.25 -0.6 405,478 - GFF1756 0.25 -0.8 405,478 - GFF1756 0.25 -0.5 405,478 - GFF1756 0.25 +1.0 405,505 + GFF1756 0.27 -1.6 405,688 + GFF1756 0.39 -1.7 405,688 + GFF1756 0.39 +2.9 405,688 + GFF1756 0.39 +0.3 405,688 + GFF1756 0.39 -0.2 405,688 + GFF1756 0.39 -0.2 405,689 - GFF1756 0.39 +0.3 405,689 - GFF1756 0.39 -0.4 405,689 - GFF1756 0.39 -2.2 405,689 - GFF1756 0.39 -0.2 405,910 + GFF1756 0.54 -0.5 405,911 - GFF1756 0.54 -0.4 405,911 - GFF1756 0.54 +0.6 405,911 - GFF1756 0.54 -0.2 405,911 - GFF1756 0.54 -1.1 405,953 - GFF1756 0.57 -0.1
Or see this region's nucleotide sequence