Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1734 and GFF1735 are separated by 246 nucleotides GFF1735 and GFF1736 are separated by 65 nucleotides GFF1736 and GFF1737 are separated by 218 nucleotides
GFF1734 - hypothetical protein, at 382,695 to 383,300
GFF1734
GFF1735 - hypothetical protein, at 383,547 to 384,242
GFF1735
GFF1736 - Aspartate 1-decarboxylase, at 384,308 to 384,757
GFF1736
GFF1737 - scyllo-inositol 2-dehydrogenase (NAD(+)), at 384,976 to 385,983
GFF1737
Position (kb) 383
384
385 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 382.567 kb on + strand at 382.571 kb on + strand at 382.571 kb on + strand at 382.572 kb on - strand at 382.572 kb on - strand at 382.572 kb on - strand at 382.576 kb on - strand at 382.576 kb on - strand at 382.578 kb on + strand at 382.579 kb on - strand at 382.827 kb on + strand, within GFF1734 at 382.827 kb on + strand, within GFF1734 at 382.827 kb on + strand, within GFF1734 at 382.912 kb on - strand, within GFF1734 at 382.989 kb on + strand, within GFF1734 at 383.055 kb on + strand, within GFF1734 at 383.076 kb on + strand, within GFF1734 at 383.077 kb on - strand, within GFF1734 at 383.158 kb on + strand, within GFF1734 at 383.267 kb on + strand at 383.310 kb on + strand at 383.368 kb on - strand at 383.480 kb on + strand at 384.402 kb on + strand, within GFF1736 at 384.487 kb on - strand, within GFF1736 at 384.487 kb on - strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.588 kb on + strand, within GFF1736 at 384.589 kb on - strand, within GFF1736 at 384.589 kb on - strand, within GFF1736 at 384.648 kb on - strand, within GFF1736 at 384.648 kb on - strand, within GFF1736 at 384.648 kb on - strand, within GFF1736 at 384.696 kb on + strand, within GFF1736 at 384.799 kb on + strand at 384.799 kb on + strand at 384.824 kb on + strand at 384.859 kb on + strand at 384.923 kb on + strand at 384.923 kb on + strand at 384.927 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 382,567 + -1.7 382,571 + +1.1 382,571 + +0.9 382,572 - +0.3 382,572 - +1.1 382,572 - +0.0 382,576 - +0.3 382,576 - +1.2 382,578 + +0.1 382,579 - +0.5 382,827 + GFF1734 0.22 +0.5 382,827 + GFF1734 0.22 +0.3 382,827 + GFF1734 0.22 +1.2 382,912 - GFF1734 0.36 -2.3 382,989 + GFF1734 0.49 +0.8 383,055 + GFF1734 0.59 +1.5 383,076 + GFF1734 0.63 +0.4 383,077 - GFF1734 0.63 -0.4 383,158 + GFF1734 0.76 +0.1 383,267 + -0.6 383,310 + -1.6 383,368 - -0.3 383,480 + -1.1 384,402 + GFF1736 0.21 +0.1 384,487 - GFF1736 0.40 +0.9 384,487 - GFF1736 0.40 -1.3 384,588 + GFF1736 0.62 -0.4 384,588 + GFF1736 0.62 -0.1 384,588 + GFF1736 0.62 -1.1 384,588 + GFF1736 0.62 +0.3 384,588 + GFF1736 0.62 -0.4 384,588 + GFF1736 0.62 -1.4 384,588 + GFF1736 0.62 -0.2 384,589 - GFF1736 0.62 -0.1 384,589 - GFF1736 0.62 -0.3 384,648 - GFF1736 0.76 +0.0 384,648 - GFF1736 0.76 +0.7 384,648 - GFF1736 0.76 -1.2 384,696 + GFF1736 0.86 -0.7 384,799 + -0.1 384,799 + +0.0 384,824 + -2.9 384,859 + -1.4 384,923 + -0.0 384,923 + -1.7 384,927 + -1.1
Or see this region's nucleotide sequence