Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1697 and GFF1698 are separated by 7 nucleotides GFF1698 and GFF1699 overlap by 4 nucleotides GFF1699 and GFF1700 are separated by 123 nucleotides GFF1700 and GFF1701 are separated by 11 nucleotides
GFF1697 - Aromatic amino acid exporter YddG, at 347,014 to 347,868
GFF1697
GFF1698 - CTP pyrophosphohydrolase, at 347,876 to 348,280
GFF1698
GFF1699 - Arginine biosynthesis bifunctional protein ArgJ, at 348,277 to 349,518
GFF1699
GFF1700 - hypothetical protein, at 349,642 to 350,070
GFF1700
GFF1701 - Acetylornithine deacetylase, at 350,082 to 351,254
GFF1701
Position (kb) 348
349
350 Strain fitness (log2 ratio) -1
0
1 at 347.374 kb on - strand, within GFF1697 at 347.415 kb on - strand, within GFF1697 at 347.415 kb on - strand, within GFF1697 at 347.577 kb on - strand, within GFF1697 at 347.577 kb on - strand, within GFF1697 at 347.670 kb on - strand, within GFF1697 at 348.051 kb on + strand, within GFF1698 at 349.953 kb on - strand, within GFF1700 at 350.221 kb on - strand, within GFF1701 at 350.221 kb on - strand, within GFF1701
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 347,374 - GFF1697 0.42 -0.3 347,415 - GFF1697 0.47 -0.1 347,415 - GFF1697 0.47 -0.0 347,577 - GFF1697 0.66 -0.5 347,577 - GFF1697 0.66 +1.1 347,670 - GFF1697 0.77 -0.4 348,051 + GFF1698 0.43 +0.7 349,953 - GFF1700 0.72 -0.1 350,221 - GFF1701 0.12 +0.2 350,221 - GFF1701 0.12 -0.7
Or see this region's nucleotide sequence