Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1689 and GFF1690 are separated by 323 nucleotides GFF1690 and GFF1691 are separated by 83 nucleotides
GFF1689 - hypothetical protein, at 339,400 to 340,152
GFF1689
GFF1690 - hypothetical protein, at 340,476 to 341,093
GFF1690
GFF1691 - hypothetical protein, at 341,177 to 342,550
GFF1691
Position (kb) 340
341
342 Strain fitness (log2 ratio) -2
-1
0
1 at 340.301 kb on - strand at 340.305 kb on + strand at 340.305 kb on + strand at 340.306 kb on - strand at 340.306 kb on - strand at 340.306 kb on - strand at 340.311 kb on + strand at 340.590 kb on + strand, within GFF1690 at 340.590 kb on + strand, within GFF1690 at 340.590 kb on + strand, within GFF1690 at 340.590 kb on + strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.797 kb on + strand, within GFF1690 at 340.797 kb on + strand, within GFF1690 at 340.797 kb on + strand, within GFF1690 at 340.798 kb on - strand, within GFF1690 at 340.798 kb on - strand, within GFF1690 at 341.181 kb on + strand at 341.181 kb on + strand at 341.181 kb on + strand at 341.182 kb on - strand at 341.182 kb on - strand at 341.182 kb on - strand at 341.182 kb on - strand at 341.208 kb on + strand at 341.209 kb on - strand at 341.275 kb on - strand at 341.315 kb on + strand, within GFF1691 at 341.315 kb on + strand, within GFF1691 at 341.315 kb on + strand, within GFF1691 at 341.315 kb on + strand, within GFF1691 at 341.332 kb on + strand, within GFF1691 at 341.476 kb on - strand, within GFF1691 at 341.553 kb on + strand, within GFF1691 at 341.554 kb on - strand, within GFF1691 at 341.554 kb on - strand, within GFF1691 at 341.727 kb on + strand, within GFF1691 at 341.728 kb on - strand, within GFF1691 at 341.752 kb on - strand, within GFF1691 at 342.010 kb on - strand, within GFF1691 at 342.010 kb on - strand, within GFF1691 at 342.010 kb on - strand, within GFF1691
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 340,301 - -1.3 340,305 + -2.0 340,305 + -1.5 340,306 - -1.0 340,306 - +0.3 340,306 - -0.4 340,311 + -0.1 340,590 + GFF1690 0.18 -1.8 340,590 + GFF1690 0.18 -1.1 340,590 + GFF1690 0.18 +0.9 340,590 + GFF1690 0.18 +0.0 340,591 - GFF1690 0.19 -0.2 340,591 - GFF1690 0.19 +1.7 340,591 - GFF1690 0.19 -1.2 340,591 - GFF1690 0.19 -0.1 340,797 + GFF1690 0.52 +0.3 340,797 + GFF1690 0.52 -2.2 340,797 + GFF1690 0.52 +0.0 340,798 - GFF1690 0.52 +0.5 340,798 - GFF1690 0.52 +1.3 341,181 + -1.4 341,181 + +0.1 341,181 + +0.2 341,182 - -0.1 341,182 - +0.4 341,182 - -0.1 341,182 - +0.8 341,208 + +0.2 341,209 - +0.9 341,275 - -0.4 341,315 + GFF1691 0.10 -0.5 341,315 + GFF1691 0.10 +0.0 341,315 + GFF1691 0.10 -1.1 341,315 + GFF1691 0.10 -0.1 341,332 + GFF1691 0.11 +0.7 341,476 - GFF1691 0.22 -0.7 341,553 + GFF1691 0.27 -0.8 341,554 - GFF1691 0.27 +0.5 341,554 - GFF1691 0.27 +0.7 341,727 + GFF1691 0.40 +0.2 341,728 - GFF1691 0.40 -1.1 341,752 - GFF1691 0.42 +0.0 342,010 - GFF1691 0.61 +0.5 342,010 - GFF1691 0.61 -0.5 342,010 - GFF1691 0.61 +0.2
Or see this region's nucleotide sequence