Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1642 and GFF1643 are separated by 192 nucleotides GFF1643 and GFF1644 are separated by 5 nucleotides
GFF1642 - hypothetical protein, at 293,736 to 294,530
GFF1642
GFF1643 - ADP-ribose pyrophosphatase, at 294,723 to 295,340
GFF1643
GFF1644 - putative ABC transporter ATP-binding protein YejF, at 295,346 to 296,980
GFF1644
Position (kb) 294
295
296 Strain fitness (log2 ratio) -1
0
1 at 293.880 kb on + strand, within GFF1642 at 293.880 kb on + strand, within GFF1642 at 293.881 kb on - strand, within GFF1642 at 294.025 kb on - strand, within GFF1642 at 294.094 kb on + strand, within GFF1642 at 294.094 kb on + strand, within GFF1642 at 294.094 kb on + strand, within GFF1642 at 294.095 kb on - strand, within GFF1642 at 294.306 kb on + strand, within GFF1642 at 294.307 kb on - strand, within GFF1642 at 294.307 kb on - strand, within GFF1642 at 294.539 kb on + strand at 294.540 kb on - strand at 294.540 kb on - strand at 294.540 kb on - strand at 294.937 kb on + strand, within GFF1643 at 294.937 kb on + strand, within GFF1643 at 294.937 kb on + strand, within GFF1643 at 294.938 kb on - strand, within GFF1643 at 294.949 kb on + strand, within GFF1643 at 294.949 kb on + strand, within GFF1643 at 294.949 kb on + strand, within GFF1643 at 294.950 kb on - strand, within GFF1643 at 294.950 kb on - strand, within GFF1643 at 294.950 kb on - strand, within GFF1643 at 294.950 kb on - strand, within GFF1643 at 295.174 kb on + strand, within GFF1643 at 295.175 kb on - strand, within GFF1643 at 295.274 kb on - strand, within GFF1643 at 295.274 kb on - strand, within GFF1643
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 293,880 + GFF1642 0.18 -0.4 293,880 + GFF1642 0.18 +1.7 293,881 - GFF1642 0.18 -0.9 294,025 - GFF1642 0.36 +0.6 294,094 + GFF1642 0.45 +0.3 294,094 + GFF1642 0.45 +0.4 294,094 + GFF1642 0.45 -1.1 294,095 - GFF1642 0.45 -0.9 294,306 + GFF1642 0.72 -0.8 294,307 - GFF1642 0.72 -0.2 294,307 - GFF1642 0.72 +0.7 294,539 + +0.0 294,540 - +0.7 294,540 - -0.3 294,540 - +1.5 294,937 + GFF1643 0.35 -0.8 294,937 + GFF1643 0.35 -0.6 294,937 + GFF1643 0.35 +0.3 294,938 - GFF1643 0.35 -0.1 294,949 + GFF1643 0.37 -0.0 294,949 + GFF1643 0.37 -1.1 294,949 + GFF1643 0.37 +0.8 294,950 - GFF1643 0.37 +1.1 294,950 - GFF1643 0.37 +0.2 294,950 - GFF1643 0.37 -0.2 294,950 - GFF1643 0.37 +1.0 295,174 + GFF1643 0.73 +0.2 295,175 - GFF1643 0.73 +0.3 295,274 - GFF1643 0.89 -0.1 295,274 - GFF1643 0.89 +1.0
Or see this region's nucleotide sequence